Literature DB >> 10760254

Photo-control of helix content in a short peptide.

J R Kumita1, O S Smart, G A Woolley.   

Abstract

The alpha-helix is a key structural element in a wide range of peptides and proteins. We report here the design, synthesis, and characterization of a modified peptide in which the helix content can be reversibly photoregulated. The peptide contains two cysteine residues that are cross-linked by an azobenzene derivative in an intramolecular fashion. In accordance with the design, the photoisomerization of the azobenzene cross-linker from the trans to the cis form causes a large increase in the helix content of the peptide, in water.

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Year:  2000        PMID: 10760254      PMCID: PMC18097          DOI: 10.1073/pnas.97.8.3803

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  17 in total

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Authors:  K T O'Neil; W F DeGrado
Journal:  Science       Date:  1990-11-02       Impact factor: 47.728

2.  The structure of proteins; two hydrogen-bonded helical configurations of the polypeptide chain.

Authors:  L PAULING; R B COREY; H R BRANSON
Journal:  Proc Natl Acad Sci U S A       Date:  1951-04       Impact factor: 11.205

Review 3.  Circular dichroism.

Authors:  R W Woody
Journal:  Methods Enzymol       Date:  1995       Impact factor: 1.600

Review 4.  Methods to estimate the conformation of proteins and polypeptides from circular dichroism data.

Authors:  N J Greenfield
Journal:  Anal Biochem       Date:  1996-03-01       Impact factor: 3.365

5.  Unusually stable helix formation in short alanine-based peptides.

Authors:  S Marqusee; V H Robbins; R L Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  1989-07       Impact factor: 11.205

6.  Helix-coil transition of the isolated amino terminus of ribonuclease.

Authors:  J E Brown; W A Klee
Journal:  Biochemistry       Date:  1971-02-02       Impact factor: 3.162

7.  Alanine is helix-stabilizing in both template-nucleated and standard peptide helices.

Authors:  C A Rohl; W Fiori; R L Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-30       Impact factor: 11.205

8.  Conformational consequences of i, i + 3 cystine linkages: nucleation for alpha-helicity?

Authors:  M Pellegrini; M Royo; M Chorev; D F Mierke
Journal:  J Pept Res       Date:  1997-05

Review 9.  Controlling cell chemistry with caged compounds.

Authors:  S R Adams; R Y Tsien
Journal:  Annu Rev Physiol       Date:  1993       Impact factor: 19.318

10.  A model peptide with enhanced helicity.

Authors:  G Merutka; W Shalongo; E Stellwagen
Journal:  Biochemistry       Date:  1991-04-30       Impact factor: 3.162

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  43 in total

1.  Picosecond conformational transition and equilibration of a cyclic peptide.

Authors:  Jens Bredenbeck; Jan Helbing; Arne Sieg; Tobias Schrader; Wolfgang Zinth; Christian Renner; Raymond Behrendt; Luis Moroder; Josef Wachtveitl; Peter Hamm
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-07       Impact factor: 11.205

Review 2.  Spectroscopic studies of protein folding: linear and nonlinear methods.

Authors:  Arnaldo L Serrano; Matthias M Waegele; Feng Gai
Journal:  Protein Sci       Date:  2011-12-28       Impact factor: 6.725

3.  Tightening up the structure, lighting up the pathway: Application of molecular constraints and light to manipulate protein folding, self-assembly and function.

Authors:  Beatrice N Markiewicz; Robert M Culik; Feng Gai
Journal:  Sci China Chem       Date:  2014-12       Impact factor: 9.445

4.  Alpha-helix formation in a photoswitchable peptide tracked from picoseconds to microseconds by time-resolved IR spectroscopy.

Authors:  Jens Bredenbeck; Jan Helbing; Janet R Kumita; G Andrew Woolley; Peter Hamm
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-07       Impact factor: 11.205

5.  Photoinduced conformational dynamics of a photoswitchable peptide: a nonequilibrium molecular dynamics simulation study.

Authors:  Phuong H Nguyen; Roman D Gorbunov; Gerhard Stock
Journal:  Biophys J       Date:  2006-05-26       Impact factor: 4.033

6.  Folding and unfolding of a photoswitchable peptide from picoseconds to microseconds.

Authors:  Janne A Ihalainen; Jens Bredenbeck; Rolf Pfister; Jan Helbing; Lei Chi; Ivo H M van Stokkum; G Andrew Woolley; Peter Hamm
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-19       Impact factor: 11.205

7.  Caged compounds: photorelease technology for control of cellular chemistry and physiology.

Authors:  Graham C R Ellis-Davies
Journal:  Nat Methods       Date:  2007-08       Impact factor: 28.547

8.  Alpha-Helix folding in the presence of structural constraints.

Authors:  Janne A Ihalainen; Beatrice Paoli; Stefanie Muff; Ellen H G Backus; Jens Bredenbeck; G Andrew Woolley; Amedeo Caflisch; Peter Hamm
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-09       Impact factor: 11.205

9.  Kinetic response of a photoperturbed allosteric protein.

Authors:  Brigitte Buchli; Steven A Waldauer; Reto Walser; Mateusz L Donten; Rolf Pfister; Nicolas Blöchliger; Sandra Steiner; Amedeo Caflisch; Oliver Zerbe; Peter Hamm
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-01       Impact factor: 11.205

10.  Thermodynamically Stable, Photoreversible Pharmacology in Neurons with One- and Two-Photon Excitation.

Authors:  Stefan Passlick; Matthew T Richers; Graham C R Ellis-Davies
Journal:  Angew Chem Int Ed Engl       Date:  2018-08-23       Impact factor: 15.336

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