Literature DB >> 17664946

Caged compounds: photorelease technology for control of cellular chemistry and physiology.

Graham C R Ellis-Davies1.   

Abstract

Caged compounds are light-sensitive probes that functionally encapsulate biomolecules in an inactive form. Irradiation liberates the trapped molecule, permitting targeted perturbation of a biological process. Uncaging technology and fluorescence microscopy are 'optically orthogonal': the former allows control, and the latter, observation of cellular function. Used in conjunction with other technologies (for example, patch clamp and/or genetics), the light beam becomes a uniquely powerful tool to stimulate a selected biological target in space or time. Here I describe important examples of widely used caged compounds, their design features and synthesis, as well as practical details of how to use them with living cells.

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Year:  2007        PMID: 17664946      PMCID: PMC4207253          DOI: 10.1038/nmeth1072

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  82 in total

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Authors:  E Bamberg; R J Clarke; K Fendler
Journal:  J Bioenerg Biomembr       Date:  2001-10       Impact factor: 2.945

Review 2.  Emerging roles of presynaptic proteins in Ca++-triggered exocytosis.

Authors:  Jens Rettig; Erwin Neher
Journal:  Science       Date:  2002-10-25       Impact factor: 47.728

3.  NMDA receptor subunit-dependent [Ca2+] signaling in individual hippocampal dendritic spines.

Authors:  Aleksander Sobczyk; Volker Scheuss; Karel Svoboda
Journal:  J Neurosci       Date:  2005-06-29       Impact factor: 6.167

4.  The nitrodibenzofuran chromophore: a new caging group for ultra-efficient photolysis in living cells.

Authors:  Atsuya Momotake; Nicolas Lindegger; Ernst Niggli; Robert J Barsotti; Graham C R Ellis-Davies
Journal:  Nat Methods       Date:  2006-01       Impact factor: 28.547

5.  Calcium--a life and death signal.

Authors:  M J Berridge; M D Bootman; P Lipp
Journal:  Nature       Date:  1998-10-15       Impact factor: 49.962

6.  Local calcium signalling by inositol-1,4,5-trisphosphate in Purkinje cell dendrites.

Authors:  E A Finch; G J Augustine
Journal:  Nature       Date:  1998 Dec 24-31       Impact factor: 49.962

7.  Two-photon laser scanning fluorescence microscopy.

Authors:  W Denk; J H Strickler; W W Webb
Journal:  Science       Date:  1990-04-06       Impact factor: 47.728

8.  Photo-mediated gene activation using caged RNA/DNA in zebrafish embryos.

Authors:  H Ando; T Furuta; R Y Tsien; H Okamoto
Journal:  Nat Genet       Date:  2001-08       Impact factor: 38.330

9.  Development and application of caged calcium.

Authors:  Graham C R Ellis-Davies
Journal:  Methods Enzymol       Date:  2003       Impact factor: 1.600

10.  Targeting expression with light using caged DNA.

Authors:  W T Monroe; M M McQuain; M S Chang; J S Alexander; F R Haselton
Journal:  J Biol Chem       Date:  1999-07-23       Impact factor: 5.157

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  210 in total

1.  Engineering light-regulated ion channels.

Authors:  Doris L Fortin; Timothy W Dunn; Richard H Kramer
Journal:  Cold Spring Harb Protoc       Date:  2011-06-01

2.  Local small airway epithelial injury induces global smooth muscle contraction and airway constriction.

Authors:  Jian Zhou; Martha B Alvarez-Elizondo; Elliot Botvinick; Steven C George
Journal:  J Appl Physiol (1985)       Date:  2011-11-23

3.  A novel method for spatially complex diffraction-limited photoactivation and photobleaching in living cells.

Authors:  Vyacheslav M Shkryl; Joshua T Maxwell; Lothar A Blatter
Journal:  J Physiol       Date:  2011-12-19       Impact factor: 5.182

4.  Flash photolysis of caged compounds in the cilia of olfactory sensory neurons.

Authors:  Anna Boccaccio; Claudia Sagheddu; Anna Menini
Journal:  J Vis Exp       Date:  2011-10-29       Impact factor: 1.355

Review 5.  Chemical tools for studying directed cell migration.

Authors:  Brenda N Goguen; Barbara Imperiali
Journal:  ACS Chem Biol       Date:  2011-10-20       Impact factor: 5.100

Review 6.  The chemical biology of synapses and neuronal circuits.

Authors:  Haruhiko Bito
Journal:  Nat Chem Biol       Date:  2010-08       Impact factor: 15.040

7.  Photochemical tools to study dynamic biological processes.

Authors:  Alexandre Specht; Frédéric Bolze; Ziad Omran; Jean-François Nicoud; Maurice Goeldner
Journal:  HFSP J       Date:  2009-05-22

Review 8.  Measurement of single-cell dynamics.

Authors:  David G Spiller; Christopher D Wood; David A Rand; Michael R H White
Journal:  Nature       Date:  2010-06-10       Impact factor: 49.962

9.  Thermodynamically Stable, Photoreversible Pharmacology in Neurons with One- and Two-Photon Excitation.

Authors:  Stefan Passlick; Matthew T Richers; Graham C R Ellis-Davies
Journal:  Angew Chem Int Ed Engl       Date:  2018-08-23       Impact factor: 15.336

10.  Chromatically independent, two-color uncaging of glutamate and GABA with one- or two-photon excitation.

Authors:  Stefan Passlick; Graham C R Ellis-Davies
Journal:  Methods Enzymol       Date:  2019-05-30       Impact factor: 1.600

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