Literature DB >> 10754107

Localization of 113 anchor loci in pigs: improvement of the comparative map for humans, pigs, and goats.

P Pinton1, L Schibler, E Cribiu, J Gellin, M Yerle.   

Abstract

In total, 113 genes that have already been located in humans and goats were cytogenetically mapped in pigs. For this purpose, 165 gene-containing bacterial artificial chromosomes (BACs) isolated in goats were used in heterologous fluorescent in situ hybridization on porcine chromosomes. Among them, 113 (or 69%) gave clear and specific signals, and 52 did not work in heterologous conditions. These localizations are a significant contribution to development of the porcine gene map and also to the comparative map for humans and pigs. They allowed us to specify the information obtained by Zoo-FISH while taking the gene order into account; the number of conserved fragments detected for human and pig chromosomes reached 84. The average size of conserved fragments could be estimated at 33 cM. As these genes had already been mapped in goats, the comparison was extended to ruminants. The previous results obtained in this species, suggesting a correlation between human chromosome abnormalities and evolutionary breakpoints, were confirmed in pigs.

Entities:  

Mesh:

Year:  2000        PMID: 10754107     DOI: 10.1007/s003350010057

Source DB:  PubMed          Journal:  Mamm Genome        ISSN: 0938-8990            Impact factor:   2.957


  13 in total

1.  Comparative mapping in the pig: localization of 214 expressed sequence tags.

Authors:  Susanna Cirera; Claus B Jørgensen; Milena Sawera; Terje Raudsepp; Bhanu P Chowdhary; Merete Fredholm
Journal:  Mamm Genome       Date:  2003-06       Impact factor: 2.957

2.  Characterization of 298 ESTs from porcine back fat tissue and their assignment to the SSRH radiation hybrid map.

Authors:  Ayumi Mikawa; Hideaki Suzuki; Kohei Suzuki; Daisuke Toki; Hirohide Uenishi; Takashi Awata; Noriyuki Hamasima
Journal:  Mamm Genome       Date:  2004-04       Impact factor: 2.957

3.  Polymorphisms of the 5' regulatory region of the porcine PPARGC1A gene and the effects on muscle fiber characteristics and meat quality.

Authors:  J M Kim; K S Lim; E A Lee; K T Lee; T H Kim; Y C Ryu; K C Hong
Journal:  Mol Biol Rep       Date:  2011-07-17       Impact factor: 2.316

4.  The first-generation whole-genome radiation hybrid map in the horse identifies conserved segments in human and mouse genomes.

Authors:  Bhanu P Chowdhary; Terje Raudsepp; Srinivas R Kata; Glenda Goh; Lee V Millon; Veronica Allan; François Piumi; Gérard Guérin; June Swinburne; Matthew Binns; Teri L Lear; Jim Mickelson; James Murray; Douglas F Antczak; James E Womack; Loren C Skow
Journal:  Genome Res       Date:  2003-04       Impact factor: 9.043

5.  A high-resolution physical map of equine homologs of HSA19 shows divergent evolution compared with other mammals.

Authors:  Candice Brinkmeyer-Langford; Terje Raudsepp; Eun-Joon Lee; Glenda Goh; Alejandro A Schäffer; Richa Agarwala; Michelle L Wagner; Teruaki Tozaki; Loren C Skow; James E Womack; James R Mickelson; Bhanu P Chowdhary
Journal:  Mamm Genome       Date:  2005-09-14       Impact factor: 2.957

6.  Estimation of the extent of synteny between Tetraodon nigroviridis and Homo sapiens genomes.

Authors:  Alain Bernot; Jean Weissenbach
Journal:  J Mol Evol       Date:  2004-10       Impact factor: 2.395

7.  Comparative map between the domestic pig and dog.

Authors:  L S Biltueva; F Yang; N V Vorobieva; A S Graphodatsky
Journal:  Mamm Genome       Date:  2004-10       Impact factor: 2.957

8.  Cross-species chromosome painting in Cetartiodactyla: reconstructing the karyotype evolution in key phylogenetic lineages.

Authors:  Anastasia I Kulemzina; Vladimir A Trifonov; Polina L Perelman; Nadezhda V Rubtsova; Vitaly Volobuev; Malcolm A Ferguson-Smith; Roscoe Stanyon; Fengtang Yang; Alexander S Graphodatsky
Journal:  Chromosome Res       Date:  2009-04-07       Impact factor: 5.239

9.  Molecular in situ hybridization analysis of sheep and goat BAC clones identifies the transcriptional orientation of T cell receptor gamma genes on chromosome 4 in bovids.

Authors:  R Antonacci; G Vaccarelli; G P Di Meo; B Piccinni; M C Miccoli; E P Cribiu; A Perucatti; L Iannuzzi; S Ciccarese
Journal:  Vet Res Commun       Date:  2007-02-05       Impact factor: 2.816

10.  A robust linkage map of the porcine autosomes based on gene-associated SNPs.

Authors:  Rikke K K Vingborg; Vivi R Gregersen; Bujie Zhan; Frank Panitz; Anette Høj; Kirsten K Sørensen; Lone B Madsen; Knud Larsen; Henrik Hornshøj; Xuefei Wang; Christian Bendixen
Journal:  BMC Genomics       Date:  2009-03-27       Impact factor: 3.969

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.