Literature DB >> 15520883

Comparative map between the domestic pig and dog.

L S Biltueva1, F Yang, N V Vorobieva, A S Graphodatsky.   

Abstract

Cross-species chromosome painting with probes derived from flow-sorted dog and human chromosomes was used to construct a high-resolution comparative map for the pig. In total 98 conserved autosomal segments between pig and dog were detected by probes specific for the 38 autosomes and X Chromosome of the dog. Further integration of our results with the published human--dog and cat--dog comparative maps, and with data from comparative gene mapping, increases the resolution of the current pig--human comparative map. It allows for the conserved syntenies detected in the pig, human, and cat to be aligned against the putative ancestral karyotype of eutherian mammals and for the history of karyotype evolution of the pig lineage to be reconstructed. Fifteen fusions, 17 fissions, and 23 inversions are required to convert the ancestral mammalian karyotype into the extant karyotype of the pig.

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Year:  2004        PMID: 15520883     DOI: 10.1007/s00335-004-2391-3

Source DB:  PubMed          Journal:  Mamm Genome        ISSN: 0938-8990            Impact factor:   2.957


  36 in total

1.  Integration of porcine chromosome 13 maps.

Authors:  M Van Poucke; M Yerle; C Tuggle; F Piumi; C Genêt; A Van Zeveren; L J Peelman
Journal:  Cytogenet Cell Genet       Date:  2001

2.  A first-generation EST RH comparative map of the porcine and human genome.

Authors:  Anette Rink; Elizabeth M Santschi; Katie M Eyer; Benjamin Roelofs; Markus Hess; Myra Godfrey; Elif K Karajusuf; Martine Yerle; Denis Milan; Craig W Beattie
Journal:  Mamm Genome       Date:  2002-10       Impact factor: 2.957

3.  Reciprocal chromosome painting between a New World primate, the woolly monkey, and humans.

Authors:  R Stanyon; S Consigliere; F Bigoni; M Ferguson-Smith; P C O'Brien; J Wienberg
Journal:  Chromosome Res       Date:  2001       Impact factor: 5.239

4.  Reciprocal chromosome painting illuminates the history of genome evolution of the domestic cat, dog and human.

Authors:  F Yang; A S Graphodatsky; P C O'Brien; A Colabella; N Solanky; M Squire; D R Sargan; M A Ferguson-Smith
Journal:  Chromosome Res       Date:  2000       Impact factor: 5.239

Review 5.  Counting on comparative maps.

Authors:  J H Nadeau; D Sankoff
Journal:  Trends Genet       Date:  1998-12       Impact factor: 11.639

6.  A first-generation porcine whole-genome radiation hybrid map.

Authors:  R J Hawken; J Murtaugh; G H Flickinger; M Yerle; A Robic; D Milan; J Gellin; C W Beattie; L B Schook; L J Alexander
Journal:  Mamm Genome       Date:  1999-08       Impact factor: 2.957

7.  Precise mapping of breakpoints in conserved synteny between human chromosome 1 and pig chromosomes 4, 6 and 9.

Authors:  H S Sun; C K Tuggle; A Goureau; C J Fitzsimmons; P Pinton; P Chardon; M Yerle
Journal:  Anim Genet       Date:  2002-04       Impact factor: 3.169

8.  Dog chromosome-specific paints reveal evolutionary inter- and intrachromosomal rearrangements in the American mink and human.

Authors:  A S Graphodatsky; F Yang; N Serdukova; P Perelman; N S Zhdanova; M A Ferguson-Smith
Journal:  Cytogenet Cell Genet       Date:  2000

9.  The dog genome: survey sequencing and comparative analysis.

Authors:  Ewen F Kirkness; Vineet Bafna; Aaron L Halpern; Samuel Levy; Karin Remington; Douglas B Rusch; Arthur L Delcher; Mihai Pop; Wei Wang; Claire M Fraser; J Craig Venter
Journal:  Science       Date:  2003-09-26       Impact factor: 47.728

10.  Standard karyotype of the domestic pig. Committee for the Standardized Karyotype of the Domestic Pig.

Authors:  I Gustavsson
Journal:  Hereditas       Date:  1988       Impact factor: 3.271

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  13 in total

1.  High-resolution comparative chromosome painting in the Arizona collared peccary (Pecari tajacu, Tayassuidae): a comparison with the karyotype of pig and sheep.

Authors:  Filomena Adega; Raquel Chaves; Andrea Kofler; Paul R Krausman; Julio Masabanda; Johannes Wienberg; Henrique Guedes-Pinto
Journal:  Chromosome Res       Date:  2006-04-20       Impact factor: 5.239

2.  Cross-species chromosome painting among camel, cattle, pig and human: further insights into the putative Cetartiodactyla ancestral karyotype.

Authors:  Gabriel Balmus; Vladimir A Trifonov; Larisa S Biltueva; Patricia C M O'Brien; Elena S Alkalaeva; Beiyuan Fu; Julian A Skidmore; Twink Allen; Alexander S Graphodatsky; Fengtang Yang; Malcolm A Ferguson-Smith
Journal:  Chromosome Res       Date:  2007-06-29       Impact factor: 5.239

3.  Comparative genome maps of the pangolin, hedgehog, sloth, anteater and human revealed by cross-species chromosome painting: further insight into the ancestral karyotype and genome evolution of eutherian mammals.

Authors:  Fengtang Yang; Alexander S Graphodatsky; Tangliang Li; Beiyuan Fu; Gauthier Dobigny; Jinghuan Wang; Polina L Perelman; Natalya A Serdukova; Weiting Su; Patricia Cm O'Brien; Yingxiang Wang; Malcolm A Ferguson-Smith; Vitaly Volobouev; Wenhui Nie
Journal:  Chromosome Res       Date:  2006-04-20       Impact factor: 5.239

4.  High-resolution chromosome painting reveals the first genetic signature for the chiropteran suborder Pteropodiformes (Mammalia: Chiroptera).

Authors:  Marianne Volleth; Fengtang Yang; Stefan Müller
Journal:  Chromosome Res       Date:  2011-03-11       Impact factor: 5.239

5.  Phylogenomics of the dog and fox family (Canidae, Carnivora) revealed by chromosome painting.

Authors:  Alexander S Graphodatsky; Polina L Perelman; Natalya V Sokolovskaya; Violetta R Beklemisheva; Natalya A Serdukova; Gauthier Dobigny; Stephen J O'Brien; Malcolm A Ferguson-Smith; Fengtang Yang
Journal:  Chromosome Res       Date:  2008       Impact factor: 5.239

6.  Multidirectional cross-species painting illuminates the history of karyotypic evolution in Perissodactyla.

Authors:  Vladimir A Trifonov; Roscoe Stanyon; Anastasia I Nesterenko; Beiyuan Fu; Polina L Perelman; Patricia C M O'Brien; Gary Stone; Nadezhda V Rubtsova; Marlys L Houck; Terence J Robinson; Malcolm A Ferguson-Smith; Gauthier Dobigny; Alexander S Graphodatsky; Fengtang Yang
Journal:  Chromosome Res       Date:  2008       Impact factor: 5.239

7.  Cross-species chromosome painting in Cetartiodactyla: reconstructing the karyotype evolution in key phylogenetic lineages.

Authors:  Anastasia I Kulemzina; Vladimir A Trifonov; Polina L Perelman; Nadezhda V Rubtsova; Vitaly Volobuev; Malcolm A Ferguson-Smith; Roscoe Stanyon; Fengtang Yang; Alexander S Graphodatsky
Journal:  Chromosome Res       Date:  2009-04-07       Impact factor: 5.239

8.  A meiotic linkage map of the silver fox, aligned and compared to the canine genome.

Authors:  Anna V Kukekova; Lyudmila N Trut; Irina N Oskina; Jennifer L Johnson; Svetlana V Temnykh; Anastasiya V Kharlamova; Darya V Shepeleva; Rimma G Gulievich; Svetlana G Shikhevich; Alexander S Graphodatsky; Gustavo D Aguirre; Gregory M Acland
Journal:  Genome Res       Date:  2007-02-06       Impact factor: 9.043

9.  Chromhome: a rich internet application for accessing comparative chromosome homology maps.

Authors:  Sridevi Nagarajan; Willem Rens; James Stalker; Tony Cox; Malcolm A Ferguson-Smith
Journal:  BMC Bioinformatics       Date:  2008-03-26       Impact factor: 3.169

10.  A robust linkage map of the porcine autosomes based on gene-associated SNPs.

Authors:  Rikke K K Vingborg; Vivi R Gregersen; Bujie Zhan; Frank Panitz; Anette Høj; Kirsten K Sørensen; Lone B Madsen; Knud Larsen; Henrik Hornshøj; Xuefei Wang; Christian Bendixen
Journal:  BMC Genomics       Date:  2009-03-27       Impact factor: 3.969

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