Literature DB >> 10753807

Membrane simulations: bigger and better?

L R Forrest1, M S Sansom.   

Abstract

Molecular dynamics simulations of biological membranes have come of age. Simulations of pure lipid bilayers are extending our understanding of both optimal simulation procedures and the detailed structural dynamics of lipids in these systems. Simulation methods established using simple bilayer-embedded peptides are being extended to a wide range of membrane proteins and membrane protein models, and are beginning to reveal some of the complexities of membrane protein structural dynamics and their relationship to biological function.

Entities:  

Mesh:

Substances:

Year:  2000        PMID: 10753807     DOI: 10.1016/s0959-440x(00)00066-x

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  47 in total

1.  Model channel ion currents in NaCl-extended simple point charge water solution with applied-field molecular dynamics.

Authors:  P S Crozier; D Henderson; R L Rowley; D D Busath
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

2.  Molecular dynamics simulations of wild-type and mutant forms of the Mycobacterium tuberculosis MscL channel.

Authors:  D E Elmore; D A Dougherty
Journal:  Biophys J       Date:  2001-09       Impact factor: 4.033

3.  Mesoscopic simulation of cell membrane damage, morphology change and rupture by nonionic surfactants.

Authors:  R D Groot; K L Rabone
Journal:  Biophys J       Date:  2001-08       Impact factor: 4.033

4.  Calculating the bulk modulus for a lipid bilayer with nonequilibrium molecular dynamics simulation.

Authors:  Gary Ayton; Alexander M Smondyrev; Scott G Bardenhagen; Patrick McMurtry; Gregory A Voth
Journal:  Biophys J       Date:  2002-03       Impact factor: 4.033

5.  Influence of the environment in the conformation of alpha-helices studied by protein database search and molecular dynamics simulations.

Authors:  Mireia Olivella; Xavier Deupi; Cedric Govaerts; Leonardo Pardo
Journal:  Biophys J       Date:  2002-06       Impact factor: 4.033

6.  Simulations of membranes and other interfacial systems using P2(1) and Pc periodic boundary conditions.

Authors:  Elizabeth A Dolan; Richard M Venable; Richard W Pastor; Bernard R Brooks
Journal:  Biophys J       Date:  2002-05       Impact factor: 4.033

7.  Interaction of cardiotoxins with membranes: a molecular modeling study.

Authors:  Roman G Efremov; Pavel E Volynsky; Dmitry E Nolde; Peter V Dubovskii; Alexander S Arseniev
Journal:  Biophys J       Date:  2002-07       Impact factor: 4.033

8.  The implementation of slab geometry for membrane-channel molecular dynamics simulations.

Authors:  David Bostick; Max L Berkowitz
Journal:  Biophys J       Date:  2003-07       Impact factor: 4.033

9.  Membrane peptides and their role in protobiological evolution.

Authors:  Andrew Pohorille; Michael A Wilson; Christophe Chipot
Journal:  Orig Life Evol Biosph       Date:  2003-04       Impact factor: 1.950

10.  Bridging microscopic and mesoscopic simulations of lipid bilayers.

Authors:  Gary Ayton; Gregory A Voth
Journal:  Biophys J       Date:  2002-12       Impact factor: 4.033

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.