Literature DB >> 10747131

Identification of Campylobacter jejuni, C. coli, C. lari, C. upsaliensis, arcobacter butzleri, and A. butzleri-like species based on the glyA gene.

S T Al Rashid1, I Dakuna, H Louie, D Ng, P Vandamme, W Johnson, V L Chan.   

Abstract

Currently, the detection and identification of Campylobacter and Arcobacter species remains arduous, largely due to cross-species phenotypic similarities and a relatively narrow spectrum of biochemical reactivity. We have developed a PCR-hybridization strategy, wherein degenerate primers are used to amplify glyA fragments from samples, which are then subjected to species-specific oligodeoxyribonucleotide probe hybridizations, to identify and distinguish between Campylobacter jejuni, C. coli, C. lari, C. upsaliensis, Arcobacter butzleri, and an A. butzleri-like species. Evaluation of this strategy with genomic DNA from different type strains suggests that this approach is both specific and sensitive and thus may be applicable in a diagnostic assay to identify and differentiate these highly related species.

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Year:  2000        PMID: 10747131      PMCID: PMC86472     

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  30 in total

1.  Oligodeoxynucleotide probes for Campylobacter fetus and Campylobacter hyointestinalis based on 16S rRNA sequences.

Authors:  I V Wesley; R D Wesley; M Cardella; F E Dewhirst; B J Paster
Journal:  J Clin Microbiol       Date:  1991-09       Impact factor: 5.948

2.  Rapid identification of Campylobacter species by restriction fragment length polymorphism analysis of a PCR-amplified fragment of the gene coding for 16S rRNA.

Authors:  P Cardarelli-Leite; K Blom; C M Patton; M A Nicholson; A G Steigerwalt; S B Hunter; D J Brenner; T J Barrett; B Swaminathan
Journal:  J Clin Microbiol       Date:  1996-01       Impact factor: 5.948

3.  Fast and sensitive multiple sequence alignments on a microcomputer.

Authors:  D G Higgins; P M Sharp
Journal:  Comput Appl Biosci       Date:  1989-04

4.  Complete sequence of the Campylobacter jejuni glyA gene encoding serine hydroxymethyltransferase.

Authors:  V L Chan; H L Bingham
Journal:  Gene       Date:  1991-05-15       Impact factor: 3.688

5.  Serine hydroxymethyltransferase from Escherichia coli: purification and properties.

Authors:  V Schirch; S Hopkins; E Villar; S Angelaccio
Journal:  J Bacteriol       Date:  1985-07       Impact factor: 3.490

6.  Prevalence and characterization of hippurate-negative Campylobacter jejuni in King County, Washington.

Authors:  P A Totten; C M Patton; F C Tenover; T J Barrett; W E Stamm; A G Steigerwalt; J Y Lin; K K Holmes; D J Brenner
Journal:  J Clin Microbiol       Date:  1987-09       Impact factor: 5.948

7.  Serine hydroxymethyltransferase: origin of substrate specificity.

Authors:  S Angelaccio; S Pascarella; E Fattori; F Bossa; W Strong; V Schirch
Journal:  Biochemistry       Date:  1992-01-14       Impact factor: 3.162

8.  Rapid identification of Campylobacter species using oligonucleotide probes to 16S ribosomal RNA.

Authors:  P J Romaniuk; T J Trust
Journal:  Mol Cell Probes       Date:  1989-06       Impact factor: 2.365

9.  Cellular fatty acid composition of Campylobacter pylori from primates and ferrets compared with those of other campylobacters.

Authors:  C S Goodwin; W McConnell; R K McCulloch; C McCullough; R Hill; M A Bronsdon; G Kasper
Journal:  J Clin Microbiol       Date:  1989-05       Impact factor: 5.948

10.  Complete nucleotide sequence of the E. coli glyA gene.

Authors:  M D Plamann; L T Stauffer; M L Urbanowski; G V Stauffer
Journal:  Nucleic Acids Res       Date:  1983-04-11       Impact factor: 16.971

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  9 in total

1.  Speciation of Campylobacter coli, C. jejuni, C. helveticus, C. lari, C. sputorum, and C. upsaliensis by matrix-assisted laser desorption ionization-time of flight mass spectrometry.

Authors:  Robert E Mandrell; Leslie A Harden; Anna Bates; William G Miller; William F Haddon; Clifton K Fagerquist
Journal:  Appl Environ Microbiol       Date:  2005-10       Impact factor: 4.792

Review 2.  Taxonomy, epidemiology, and clinical relevance of the genus Arcobacter.

Authors:  Luis Collado; Maria José Figueras
Journal:  Clin Microbiol Rev       Date:  2011-01       Impact factor: 26.132

3.  Rapid identification of Campylobacter spp. by melting peak analysis of biprobes in real-time PCR.

Authors:  J M Logan; K J Edwards; N A Saunders; J Stanley
Journal:  J Clin Microbiol       Date:  2001-06       Impact factor: 5.948

4.  Colony multiplex PCR assay for identification and differentiation of Campylobacter jejuni, C. coli, C. lari, C. upsaliensis, and C. fetus subsp. fetus.

Authors:  Gehua Wang; Clifford G Clark; Tracy M Taylor; Chad Pucknell; Connie Barton; Lawrence Price; David L Woodward; Frank G Rodgers
Journal:  J Clin Microbiol       Date:  2002-12       Impact factor: 5.948

5.  Isolation, identification and differentiation of Campylobacter spp. using multiplex PCR assay from goats in Khartoum State, Sudan.

Authors:  Atif Elbrissi; Y A Sabeil; Khalda A Khalifa; Khalid Enan; Osama M Khair; A M El Hussein
Journal:  Trop Anim Health Prod       Date:  2017-02-04       Impact factor: 1.559

6.  Differentiation of Campylobacter coli, Campylobacter jejuni, Campylobacter lari, and Campylobacter upsaliensis by a multiplex PCR developed from the nucleotide sequence of the lipid A gene lpxA.

Authors:  John D Klena; Craig T Parker; Krista Knibb; J Claire Ibbitt; Phillippa M L Devane; Sharon T Horn; William G Miller; Michael E Konkel
Journal:  J Clin Microbiol       Date:  2004-12       Impact factor: 5.948

7.  Production of a monoclonal antibody specific for the major outer membrane protein of Campylobacter jejuni and characterization of the epitope.

Authors:  Hongliang Qian; Ervinna Pang; Qingyun Du; Jason Chang; Jin Dong; Say Ling Toh; Fook Kheong Ng; Ai Ling Tan; Jimmy Kwang
Journal:  Appl Environ Microbiol       Date:  2007-12-07       Impact factor: 4.792

8.  Microarray-based identification of thermophilic Campylobacter jejuni, C. coli, C. lari, and C. upsaliensis.

Authors:  Dmitriy Volokhov; Vladimir Chizhikov; Konstantin Chumakov; Avraham Rasooly
Journal:  J Clin Microbiol       Date:  2003-09       Impact factor: 5.948

9.  Species-specific identification of campylobacters by partial 16S rRNA gene sequencing.

Authors:  Gregor Gorkiewicz; Gebhard Feierl; Caroline Schober; Franz Dieber; Josef Köfer; Rudolf Zechner; Ellen L Zechner
Journal:  J Clin Microbiol       Date:  2003-06       Impact factor: 5.948

  9 in total

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