Literature DB >> 10740260

Nanopores and nucleic acids: prospects for ultrarapid sequencing.

D W Deamer1, M Akeson.   

Abstract

DNA and RNA molecules can be detected as they are driven through a nanopore by an applied electric field at rates ranging from several hundred microseconds to a few milliseconds per molecule. The nanopore can rapidly discriminate between pyrimidine and purine segments along a single-stranded nucleic acid molecule. Nanopore detection and characterization of single molecules represents a new method for directly reading information encoded in linear polymers. If single-nucleotide resolution can be achieved, it is possible that nucleic acid sequences can be determined at rates exceeding a thousand bases per second.

Entities:  

Keywords:  NASA Discipline Exobiology; Non-NASA Center

Mesh:

Substances:

Year:  2000        PMID: 10740260     DOI: 10.1016/s0167-7799(00)01426-8

Source DB:  PubMed          Journal:  Trends Biotechnol        ISSN: 0167-7799            Impact factor:   19.536


  66 in total

1.  Osmotic water transport through carbon nanotube membranes.

Authors:  Amrit Kalra; Shekhar Garde; Gerhard Hummer
Journal:  Proc Natl Acad Sci U S A       Date:  2003-07-23       Impact factor: 11.205

2.  Microfluidic device reads up to four consecutive base pairs in DNA sequencing-by-synthesis.

Authors:  Emil P Kartalov; Stephen R Quake
Journal:  Nucleic Acids Res       Date:  2004-05-20       Impact factor: 16.971

3.  DNA sequencing with nanopores.

Authors:  Grégory F Schneider; Cees Dekker
Journal:  Nat Biotechnol       Date:  2012-04-10       Impact factor: 54.908

Review 4.  Nanopore analysis: An emerging technique for studying the folding and misfolding of proteins.

Authors:  Claudia Madampage; Omid Tavassoly; Chris Christensen; Meena Kumari; Jeremy S Lee
Journal:  Prion       Date:  2012-04-01       Impact factor: 3.931

5.  Recognizing a single base in an individual DNA strand: a step toward DNA sequencing in nanopores.

Authors:  Nurit Ashkenasy; Jorge Sánchez-Quesada; Hagan Bayley; M Reza Ghadiri
Journal:  Angew Chem Int Ed Engl       Date:  2005-02-18       Impact factor: 15.336

6.  Fast DNA sequencing via transverse electronic transport.

Authors:  Johan Lagerqvist; Michael Zwolak; Massimiliano Di Ventra
Journal:  Nano Lett       Date:  2006-04       Impact factor: 11.189

7.  Influence of the environment and probes on rapid DNA sequencing via transverse electronic transport.

Authors:  Johan Lagerqvist; Michael Zwolak; Massimiliano Di Ventra
Journal:  Biophys J       Date:  2007-05-25       Impact factor: 4.033

8.  Molecular Dynamics simulation of a polymer chain translocating through a nanoscopic pore: hydrodynamic interactions versus pore radius.

Authors:  M G Gauthier; G W Slater
Journal:  Eur Phys J E Soft Matter       Date:  2008-01-31       Impact factor: 1.890

9.  Enhanced translocation of single DNA molecules through alpha-hemolysin nanopores by manipulation of internal charge.

Authors:  Giovanni Maglia; Marcela Rincon Restrepo; Ellina Mikhailova; Hagan Bayley
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-05       Impact factor: 11.205

10.  Kinetics of duplex formation for individual DNA strands within a single protein nanopore.

Authors:  S Howorka; L Movileanu; O Braha; H Bayley
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-23       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.