Literature DB >> 15666419

Recognizing a single base in an individual DNA strand: a step toward DNA sequencing in nanopores.

Nurit Ashkenasy1, Jorge Sánchez-Quesada, Hagan Bayley, M Reza Ghadiri.   

Abstract

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Year:  2005        PMID： 15666419      PMCID： PMC1828035          DOI： 10.1002/anie.200462114

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN： 1433-7851            Impact factor:   15.336


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  28 in total

1.  Driven polymer translocation through a narrow pore.

Authors:  D K Lubensky; D R Nelson
Journal:  Biophys J       Date:  1999-10       Impact factor: 4.033

2.  Capture of a single molecule in a nanocavity.

Authors:  L Q Gu; S Cheley; H Bayley
Journal:  Science       Date:  2001-01-26       Impact factor: 47.728

3.  Ion-beam sculpting at nanometre length scales.

Authors:  J Li; D Stein; C McMullan; D Branton; M J Aziz; J A Golovchenko
Journal:  Nature       Date:  2001-07-12       Impact factor: 49.962

4.  Sequence-specific detection of individual DNA strands using engineered nanopores.

Authors:  S Howorka; S Cheley; H Bayley
Journal:  Nat Biotechnol       Date:  2001-07       Impact factor: 54.908

5.  Discrimination among individual Watson-Crick base pairs at the termini of single DNA hairpin molecules.

Authors:  Wenonah A Vercoutere; Stephen Winters-Hilt; Veronica S DeGuzman; David Deamer; Sam E Ridino; Joseph T Rodgers; Hugh E Olsen; Andre Marziali; Mark Akeson
Journal:  Nucleic Acids Res       Date:  2003-02-15       Impact factor: 16.971

6.  Rapid nanopore discrimination between single polynucleotide molecules.

Authors:  A Meller; L Nivon; E Brandin; J Golovchenko; D Branton
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-01       Impact factor: 11.205

7.  Highly accurate classification of Watson-Crick basepairs on termini of single DNA molecules.

Authors:  Stephen Winters-Hilt; Wenonah Vercoutere; Veronica S DeGuzman; David Deamer; Mark Akeson; David Haussler
Journal:  Biophys J       Date:  2003-02       Impact factor: 4.033

8.  Overstretching B-DNA: the elastic response of individual double-stranded and single-stranded DNA molecules.

Authors:  S B Smith; Y Cui; C Bustamante
Journal:  Science       Date:  1996-02-09       Impact factor: 47.728

9.  Characterization of individual polynucleotide molecules using a membrane channel.

Authors:  J J Kasianowicz; E Brandin; D Branton; D W Deamer
Journal:  Proc Natl Acad Sci U S A       Date:  1996-11-26       Impact factor: 11.205

10.  A nanosensor for transmembrane capture and identification of single nucleic Acid molecules.

Authors:  Jonathan Nakane; Matthew Wiggin; Andre Marziali
Journal:  Biophys J       Date:  2004-07       Impact factor: 4.033
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  68 in total

1.  Identification of epigenetic DNA modifications with a protein nanopore.

Authors:  Emma V B Wallace; David Stoddart; Andrew J Heron; Ellina Mikhailova; Giovanni Maglia; Timothy J Donohoe; Hagan Bayley
Journal:  Chem Commun (Camb)       Date:  2010-10-06       Impact factor: 6.222

2.  DNA sequencing with nanopores.

Authors:  Grégory F Schneider; Cees Dekker
Journal:  Nat Biotechnol       Date:  2012-04-10       Impact factor: 54.908

3.  Single molecule transcription profiling with AFM.

Authors:  Jason Reed; Bud Mishra; Bede Pittenger; Sergei Magonov; Joshua Troke; Michael A Teitell; James K Gimzewski
Journal:  Nanotechnology       Date:  2007-05-09       Impact factor: 3.874

4.  Nanopore DNA sequencing with MspA.

Authors:  Ian M Derrington; Tom Z Butler; Marcus D Collins; Elizabeth Manrao; Mikhail Pavlenok; Michael Niederweis; Jens H Gundlach
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-26       Impact factor: 11.205

5.  Deciphering ionic current signatures of DNA transport through a nanopore.

Authors:  Aleksei Aksimentiev
Journal:  Nanoscale       Date:  2010-02-02       Impact factor: 7.790

Review 6.  Single molecule sensing by nanopores and nanopore devices.

Authors:  Li-Qun Gu; Ji Wook Shim
Journal:  Analyst       Date:  2009-12-22       Impact factor: 4.616

7.  Detection of DNA sequences using an alternating electric field in a nanopore capacitor.

Authors:  Grigori Sigalov; Jeffrey Comer; Gregory Timp; Aleksei Aksimentiev
Journal:  Nano Lett       Date:  2007-12-11       Impact factor: 11.189

Review 8.  The role of molecular modeling in bionanotechnology.

Authors:  Deyu Lu; Aleksei Aksimentiev; Amy Y Shih; Eduardo Cruz-Chu; Peter L Freddolino; Anton Arkhipov; Klaus Schulten
Journal:  Phys Biol       Date:  2006-02-02       Impact factor: 2.583

9.  Stochastic study of the effect of ionic strength on noncovalent interactions in protein pores.

Authors:  Qitao Zhao; Dilani A Jayawardhana; Xiyun Guan
Journal:  Biophys J       Date:  2007-11-09       Impact factor: 4.033

10.  Multiple base-recognition sites in a biological nanopore: two heads are better than one.

Authors:  David Stoddart; Giovanni Maglia; Ellina Mikhailova; Andrew J Heron; Hagan Bayley
Journal:  Angew Chem Int Ed Engl       Date:  2010       Impact factor: 15.336
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