Literature DB >> 10735881

A Bacillus subtilis gene of previously unknown function, yhaG, is translationally regulated by tryptophan-activated TRAP and appears to be involved in tryptophan transport.

J P Sarsero1, E Merino, C Yanofsky.   

Abstract

Computer analysis of the Bacillus subtilis genome sequence revealed a gene with no previously attributed function, yhaG, specifying a transcript containing a presumptive binding site for the tryptophan-activated regulatory protein, TRAP. The presumptive TRAP binding site overlaps the yhaG Shine-Dalgarno sequence and translation initiation region. TRAP was shown to regulate expression of yhaG translationally. Production of the yhaG transcript in vivo was found to compete for the binding of TRAP to other known TRAP binding sites. YhaG is likely to be a transmembrane protein involved in tryptophan transport.

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Year:  2000        PMID: 10735881      PMCID: PMC111287          DOI: 10.1128/JB.182.8.2329-2331.2000

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  15 in total

1.  A Bacillus subtilis operon containing genes of unknown function senses tRNATrp charging and regulates expression of the genes of tryptophan biosynthesis.

Authors:  J P Sarsero; E Merino; C Yanofsky
Journal:  Proc Natl Acad Sci U S A       Date:  2000-03-14       Impact factor: 11.205

2.  The structure of trp RNA-binding attenuation protein.

Authors:  A A Antson; J Otridge; A M Brzozowski; E J Dodson; G G Dodson; K S Wilson; T M Smith; M Yang; T Kurecki; P Gollnick
Journal:  Nature       Date:  1995-04-20       Impact factor: 49.962

3.  TopPred II: an improved software for membrane protein structure predictions.

Authors:  M G Claros; G von Heijne
Journal:  Comput Appl Biosci       Date:  1994-12

4.  Structure of the trp RNA-binding attenuation protein, TRAP, bound to RNA.

Authors:  A A Antson; E J Dodson; G Dodson; R B Greaves; X Chen; P Gollnick
Journal:  Nature       Date:  1999-09-16       Impact factor: 49.962

5.  Translation of trpG in Bacillus subtilis is regulated by the trp RNA-binding attenuation protein (TRAP).

Authors:  M Yang; A de Saizieu; A P van Loon; P Gollnick
Journal:  J Bacteriol       Date:  1995-08       Impact factor: 3.490

6.  TRAP, the trp RNA-binding attenuation protein of Bacillus subtilis, is a toroid-shaped molecule that binds transcripts containing GAG or UAG repeats separated by two nucleotides.

Authors:  P Babitzke; D G Bear; C Yanofsky
Journal:  Proc Natl Acad Sci U S A       Date:  1995-08-15       Impact factor: 11.205

7.  cis-acting sites in the transcript of the Bacillus subtilis trp operon regulate expression of the operon.

Authors:  M I Kuroda; D Henner; C Yanofsky
Journal:  J Bacteriol       Date:  1988-07       Impact factor: 3.490

8.  MtrB from Bacillus subtilis binds specifically to trp leader RNA in a tryptophan-dependent manner.

Authors:  J Otridge; P Gollnick
Journal:  Proc Natl Acad Sci U S A       Date:  1993-01-01       Impact factor: 11.205

9.  TRAP, the trp RNA-binding attenuation protein of Bacillus subtilis, is a multisubunit complex that appears to recognize G/UAG repeats in the trpEDCFBA and trpG transcripts.

Authors:  P Babitzke; J T Stults; S J Shire; C Yanofsky
Journal:  J Biol Chem       Date:  1994-06-17       Impact factor: 5.157

10.  Co-ordinate expression of the two threonyl-tRNA synthetase genes in Bacillus subtilis: control by transcriptional antitermination involving a conserved regulatory sequence.

Authors:  H Putzer; N Gendron; M Grunberg-Manago
Journal:  EMBO J       Date:  1992-08       Impact factor: 11.598

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  27 in total

Review 1.  Posttranscription initiation control of tryptophan metabolism in Bacillus subtilis by the trp RNA-binding attenuation protein (TRAP), anti-TRAP, and RNA structure.

Authors:  P Babitzke; P Gollnick
Journal:  J Bacteriol       Date:  2001-10       Impact factor: 3.490

2.  Cellular levels of trp RNA-binding attenuation protein in Bacillus subtilis.

Authors:  Barbara C McCabe; Paul Gollnick
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

3.  Three different systems participate in L-cystine uptake in Bacillus subtilis.

Authors:  Pierre Burguière; Sandrine Auger; Marie-Françoise Hullo; Antoine Danchin; Isabelle Martin-Verstraete
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

4.  Mechanism for pH-dependent gene regulation by amino-terminus-mediated homooligomerization of Bacillus subtilis anti-trp RNA-binding attenuation protein.

Authors:  Joseph R Sachleben; Craig A McElroy; Paul Gollnick; Mark P Foster
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-16       Impact factor: 11.205

5.  A Bacillus subtilis operon containing genes of unknown function senses tRNATrp charging and regulates expression of the genes of tryptophan biosynthesis.

Authors:  J P Sarsero; E Merino; C Yanofsky
Journal:  Proc Natl Acad Sci U S A       Date:  2000-03-14       Impact factor: 11.205

6.  Translation control of trpG from transcripts originating from the folate operon promoter of Bacillus subtilis is influenced by translation-mediated displacement of bound TRAP, while translation control of transcripts originating from a newly identified trpG promoter is not.

Authors:  Helen Yakhnin; Alexander V Yakhnin; Paul Babitzke
Journal:  J Bacteriol       Date:  2006-11-17       Impact factor: 3.490

Review 7.  Biochemical features and functional implications of the RNA-based T-box regulatory mechanism.

Authors:  Ana Gutiérrez-Preciado; Tina M Henkin; Frank J Grundy; Charles Yanofsky; Enrique Merino
Journal:  Microbiol Mol Biol Rev       Date:  2009-03       Impact factor: 11.056

8.  A novel class of modular transporters for vitamins in prokaryotes.

Authors:  Dmitry A Rodionov; Peter Hebbeln; Aymerick Eudes; Josy ter Beek; Irina A Rodionova; Guus B Erkens; Dirk J Slotboom; Mikhail S Gelfand; Andrei L Osterman; Andrew D Hanson; Thomas Eitinger
Journal:  J Bacteriol       Date:  2008-10-17       Impact factor: 3.490

9.  Crystal structure of Bacillus subtilis anti-TRAP protein, an antagonist of TRAP/RNA interaction.

Authors:  Mikhail B Shevtsov; Yanling Chen; Paul Gollnick; Alfred A Antson
Journal:  Proc Natl Acad Sci U S A       Date:  2005-11-23       Impact factor: 11.205

10.  Effects of tryptophan starvation on levels of the trp RNA-binding attenuation protein (TRAP) and anti-TRAP regulatory protein and their influence on trp operon expression in Bacillus subtilis.

Authors:  Wen-Jen Yang; Charles Yanofsky
Journal:  J Bacteriol       Date:  2005-03       Impact factor: 3.490

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