Literature DB >> 7715723

The structure of trp RNA-binding attenuation protein.

A A Antson1, J Otridge, A M Brzozowski, E J Dodson, G G Dodson, K S Wilson, T M Smith, M Yang, T Kurecki, P Gollnick.   

Abstract

The crystal structure of the trp RNA-binding attenuation protein of Bacclius subtilis solved at 1.8 A resolution reveals a novel structural arrangement in which the eleven subunits are stabilized through eleven intersubunit beta-sheets to form a beta-wheel with a large central hole. The nature of the binding of L-tryptophan in clefts between adjacent beta-sheets in the beta-wheel suggests that this binding induces conformational changes in the flexible residues 25-33 and 49-52. It is argued that upon binding, the messenger RNA target forms a matching circle in which eleven U/GAG repeats are bound to the surface of the protein ondecamer modified by the binding of L-tryptophan.

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Year:  1995        PMID: 7715723     DOI: 10.1038/374693a0

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  75 in total

Review 1.  Transcription attenuation: once viewed as a novel regulatory strategy.

Authors:  C Yanofsky
Journal:  J Bacteriol       Date:  2000-01       Impact factor: 3.490

Review 2.  Posttranscription initiation control of tryptophan metabolism in Bacillus subtilis by the trp RNA-binding attenuation protein (TRAP), anti-TRAP, and RNA structure.

Authors:  P Babitzke; P Gollnick
Journal:  J Bacteriol       Date:  2001-10       Impact factor: 3.490

3.  Cellular levels of trp RNA-binding attenuation protein in Bacillus subtilis.

Authors:  Barbara C McCabe; Paul Gollnick
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

4.  Mechanism for pH-dependent gene regulation by amino-terminus-mediated homooligomerization of Bacillus subtilis anti-trp RNA-binding attenuation protein.

Authors:  Joseph R Sachleben; Craig A McElroy; Paul Gollnick; Mark P Foster
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-16       Impact factor: 11.205

5.  Nuclease-Resistant c-di-AMP Derivatives That Differentially Recognize RNA and Protein Receptors.

Authors:  Robert E Meehan; Chad D Torgerson; Barbara L Gaffney; Roger A Jones; Scott A Strobel
Journal:  Biochemistry       Date:  2016-02-03       Impact factor: 3.162

6.  Population Distributions from Native Mass Spectrometry Titrations Reveal Nearest-Neighbor Cooperativity in the Ring-Shaped Oligomeric Protein TRAP.

Authors:  Melody L Holmquist; Elihu C Ihms; Paul Gollnick; Vicki H Wysocki; Mark P Foster
Journal:  Biochemistry       Date:  2020-06-26       Impact factor: 3.162

7.  Gene regulation by substoichiometric heterocomplex formation of undecameric TRAP and trimeric anti-TRAP.

Authors:  Elihu C Ihms; Mowei Zhou; Yun Zhang; Ian R Kleckner; Craig A McElroy; Vicki H Wysocki; Paul Gollnick; Mark P Foster
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-18       Impact factor: 11.205

8.  Translation of trpG in Bacillus subtilis is regulated by the trp RNA-binding attenuation protein (TRAP).

Authors:  M Yang; A de Saizieu; A P van Loon; P Gollnick
Journal:  J Bacteriol       Date:  1995-08       Impact factor: 3.490

9.  TRAP, the trp RNA-binding attenuation protein of Bacillus subtilis, is a toroid-shaped molecule that binds transcripts containing GAG or UAG repeats separated by two nucleotides.

Authors:  P Babitzke; D G Bear; C Yanofsky
Journal:  Proc Natl Acad Sci U S A       Date:  1995-08-15       Impact factor: 11.205

10.  trp RNA-binding attenuation protein (TRAP)-trp leader RNA interactions mediate translational as well as transcriptional regulation of the Bacillus subtilis trp operon.

Authors:  E Merino; P Babitzke; C Yanofsky
Journal:  J Bacteriol       Date:  1995-11       Impact factor: 3.490

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