Literature DB >> 10722836

Rapid internal dynamics of BPTI is insensitive to pressure. (15)N spin relaxation at 2 kbar.

S Sareth1, H Li, H Yamada, C K Woodward, K Akasaka.   

Abstract

Pressure effects on the backbone dynamics of a native basic pancreatic trypsin inhibitor (BPTI) have been measured by (15)N spin relaxation and chemical shifts at 30 and 2000 bar. The experiments utilized the on-line variable pressure cell nuclear magnetic resonance system on (15)N-uniformly labeled BPTI at a proton frequency of 750.13 MHz at 36 degrees C. Longitudinal (R(1)) and transverse (R(2)) (15)N relaxation times and ((1)H)-(15)N nuclear Overhauser effects were measured for 41 protonated backbone nitrogens at both pressures. The model free analysis of the internal dynamics gave order parameters for individual H-N vectors at both pressures. The results indicate that rapid internal dynamics in the ps-ns range for the polypeptide backbone is not significantly affected by pressure in the range between 30 bar and 2 kbar. The result is consistent with the linear pressure dependence of (1)H and (15)N chemical shifts of BPTI, which suggests that local compressibilities and amplitudes of associated conformational fluctuation are nearly invariant in the same pressure range. Overall, we conclude that at 2 kbar BPTI remains within the same native ensemble as at 1 bar, with a small shift of population from that at 1 bar.

Entities:  

Mesh:

Substances:

Year:  2000        PMID: 10722836     DOI: 10.1016/s0014-5793(00)01283-7

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  6 in total

1.  Pressure alters electronic orbital overlap in hydrogen bonds.

Authors:  H Li; H Yamada; K Akasaka; A M Gronenborn
Journal:  J Biomol NMR       Date:  2000-11       Impact factor: 2.835

2.  Exposing the Moving Parts of Proteins with NMR Spectroscopy.

Authors:  J W Peng
Journal:  J Phys Chem Lett       Date:  2012-04-02       Impact factor: 6.475

3.  Pressure-induced structural transition of mature HIV-1 protease from a combined NMR/MD simulation approach.

Authors:  Julien Roche; John M Louis; Ad Bax; Robert B Best
Journal:  Proteins       Date:  2015-10-16

4.  Impact of hydrostatic pressure on an intrinsically disordered protein: a high-pressure NMR study of α-synuclein.

Authors:  Julien Roche; Jinfa Ying; Alexander S Maltsev; Ad Bax
Journal:  Chembiochem       Date:  2013-06-28       Impact factor: 3.164

5.  Practical aspects of high-pressure NMR spectroscopy and its applications in protein biophysics and structural biology.

Authors:  José A Caro; A Joshua Wand
Journal:  Methods       Date:  2018-06-30       Impact factor: 3.608

6.  Pressure-dependent 13C chemical shifts in proteins: origins and applications.

Authors:  David J Wilton; Ryo Kitahara; Kazuyuki Akasaka; Mike P Williamson
Journal:  J Biomol NMR       Date:  2009-03-24       Impact factor: 2.835

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.