Literature DB >> 10674966

Hardy-Weinberg testing for HLA class II (DRB1, DQA1, DQB1, and DPB1) loci in 26 human ethnic groups.

J J Chen1, J A Hollenbach, E A Trachtenberg, J J Just, M Carrington, K S Rønningen, A Begovich, M C King, S McWeeney, S J Mack, H A Erlich, G Thomson.   

Abstract

Testing the fit of population data to Hardy-Weinberg proportions is crucial in the validation of many current approaches in population genetic studies. In this paper, we tested fit to Hardy-Weinberg proportions using exact approaches for both the overall and individual heterozygote genotype data of four HLA Class II loci: DRB1, DQA1, DQB1, and DPB1, from 26 human populations. Eighty of 99 overall tests fit the Hardy-Weinberg expectation (73% for DRB1, 89% for DQA1, 81% for DQB1 and 81% for DPB1). Deviations from Hardy-Weinberg proportions were both locus and group specific. Although we could not rule out other mechanisms at work, the individual test results indicated that the departure was possibly partly due to recent admixture. Evidence for selection and other sources of deviation are also discussed.

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Year:  1999        PMID: 10674966     DOI: 10.1034/j.1399-0039.1999.540601.x

Source DB:  PubMed          Journal:  Tissue Antigens        ISSN: 0001-2815


  12 in total

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Journal:  Genetics       Date:  2005-05-23       Impact factor: 4.562

3.  Epidemiology of childhood-onset type 1 diabetes in Azerbaijan: Incidence, clinical features, biochemistry, and HLA-DRB1 status.

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Journal:  Diabetes Res Clin Pract       Date:  2018-09-13       Impact factor: 5.602

4.  Clinical features, biochemistry and HLA-DRB1 status in youth-onset type 1 diabetes in Pakistan.

Authors:  Asher Fawwad; Denira Govender; Mohammad Yakoob Ahmedani; Abdul Basit; Julie Ann Lane; Steven John Mack; Mark Alvin Atkinson; Clive Henry Wasserfall; Graham David Ogle; Janelle Annette Noble
Journal:  Diabetes Res Clin Pract       Date:  2019-01-30       Impact factor: 5.602

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8.  Three microsatellites from the T1DGC MHC data set show highly significant association with type 1 diabetes, independent of the HLA-DRB1, -DQA1 and -DQB1 genes.

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Journal:  Int J Cancer       Date:  2008-10-01       Impact factor: 7.396

10.  Clinical features, biochemistry, and HLA-DRB1 status in youth-onset type 1 diabetes in Sudan.

Authors:  Tomader Ali Mohammed Ibrahim; Denira Govender; Mohamed Ahmed Abdullah; Janelle Annette Noble; Mohammed Osman Hussien; Julie Ann Lane; Steven John Mack; Gregory George Noble Martin; Mark Alvin Atkinson; Clive Henry Wasserfall; Graham David Ogle
Journal:  Pediatr Diabetes       Date:  2021-04-20       Impact factor: 3.409

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