Literature DB >> 10638816

Detecting unitary events without discretization of time.

S Grün1, M Diesmann, F Grammont, A Riehle, A Aertsen.   

Abstract

In earlier studies we developed the 'Unitary Events' analysis (Grün S. Unitary Joint-Events in Multiple-Neuron Spiking Activity: Detection, Significance and Interpretation. Reihe Physik, Band 60. Thun, Frankfurt/Main: Verlag Harri Deutsch, 1996.) to detect the presence of conspicuous spike coincidences in multiple single unit recordings and to evaluate their statistical significance. The method enabled us to study the relation between spike synchronization and behavioral events (Riehle A, Grün S, Diesmann M, Aertsen A. Spike synchronization and rate modulation differentially involved in motor cortical function. Science 1997;278:1950-1953.). There is recent experimental evidence that the timing accuracy of coincident spiking events, which might be relevant for higher brain function, may be in the range of 1-5 ms. To detect coincidences on that time scale, we sectioned the observation interval into short disjunct time slices ('bins'). Unitary Events analysis of this discretized process demonstrated that coincident events can indeed be reliably detected. However, the method looses sensitivity for higher temporal jitter of the events constituting the coincidences (Grün S. Unitary Joint-Events in Multiple-Neuron Spiking Activity: Detection, Significance and Interpretation. Reihe Physik, Band 60. Thun, Frankfurt/Main: Verlag Harri Deutsch, 1996.). Here we present a new approach, the 'multiple shift' method (MS), which overcomes the need for binning and treats the data in their (original) high time resolution (typically 1 ms, or better). Technically, coincidences are detected by shifting the spike trains against each other over the range of allowed coincidence width and integrating the number of exact coincidences (on the time resolution of the data) over all shifts. We found that the new method enhances the sensitivity for coincidences with temporal jitter. Both methods are outlined and compared on the basis of their analytical description and their application on simulated data. The performance on experimental data is illustrated.

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Mesh:

Year:  1999        PMID: 10638816     DOI: 10.1016/s0165-0270(99)00126-0

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  18 in total

1.  Robustness of the significance of spike synchrony with respect to sorting errors.

Authors:  Antonio Pazienti; Sonja Grün
Journal:  J Comput Neurosci       Date:  2006-08-14       Impact factor: 1.621

2.  Spatiotemporal dynamics of the electrical network activity in the root apex.

Authors:  E Masi; M Ciszak; G Stefano; L Renna; E Azzarello; C Pandolfi; S Mugnai; F Baluska; F T Arecchi; S Mancuso
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-20       Impact factor: 11.205

Review 3.  Data-driven significance estimation for precise spike correlation.

Authors:  Sonja Grün
Journal:  J Neurophysiol       Date:  2009-01-07       Impact factor: 2.714

4.  Estimating the contribution of assembly activity to cortical dynamics from spike and population measures.

Authors:  Michael Denker; Alexa Riehle; Markus Diesmann; Sonja Grün
Journal:  J Comput Neurosci       Date:  2010-05-18       Impact factor: 1.621

5.  State-space analysis of time-varying higher-order spike correlation for multiple neural spike train data.

Authors:  Hideaki Shimazaki; Shun-Ichi Amari; Emery N Brown; Sonja Grün
Journal:  PLoS Comput Biol       Date:  2012-03-08       Impact factor: 4.475

6.  CuBIC: cumulant based inference of higher-order correlations in massively parallel spike trains.

Authors:  Benjamin Staude; Stefan Rotter; Sonja Grün
Journal:  J Comput Neurosci       Date:  2009-10-28       Impact factor: 1.621

7.  NeuroXidence: reliable and efficient analysis of an excess or deficiency of joint-spike events.

Authors:  Gordon Pipa; Diek W Wheeler; Wolf Singer; Danko Nikolić
Journal:  J Comput Neurosci       Date:  2008-01-26       Impact factor: 1.621

8.  Statistical evaluation of synchronous spike patterns extracted by frequent item set mining.

Authors:  Emiliano Torre; David Picado-Muiño; Michael Denker; Christian Borgelt; Sonja Grün
Journal:  Front Comput Neurosci       Date:  2013-10-23       Impact factor: 2.380

9.  Discovering spike patterns in neuronal responses.

Authors:  Jean-Marc Fellous; Paul H E Tiesinga; Peter J Thomas; Terrence J Sejnowski
Journal:  J Neurosci       Date:  2004-03-24       Impact factor: 6.167

10.  Efficient identification of assembly neurons within massively parallel spike trains.

Authors:  Denise Berger; Christian Borgelt; Sebastien Louis; Abigail Morrison; Sonja Grün
Journal:  Comput Intell Neurosci       Date:  2009-09-29
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