Literature DB >> 19862611

CuBIC: cumulant based inference of higher-order correlations in massively parallel spike trains.

Benjamin Staude1,2, Stefan Rotter3, Sonja Grün4,5.   

Abstract

Recent developments in electrophysiological and optical recording techniques enable the simultaneous observation of large numbers of neurons. A meaningful interpretation of the resulting multivariate data, however, presents a serious challenge. In particular, the estimation of higher-order correlations that characterize the cooperative dynamics of groups of neurons is impeded by the combinatorial explosion of the parameter space. The resulting requirements with respect to sample size and recording time has rendered the detection of coordinated neuronal groups exceedingly difficult. Here we describe a novel approach to infer higher-order correlations in massively parallel spike trains that is less susceptible to these problems. Based on the superimposed activity of all recorded neurons, the cumulant-based inference of higher-order correlations (CuBIC) presented here exploits the fact that the absence of higher-order correlations imposes also strong constraints on correlations of lower order. Thus, estimates of only few lower-order cumulant suffice to infer higher-order correlations in the population. As a consequence, CuBIC is much better compatible with the constraints of in vivo recordings than previous approaches, which is shown by a systematic analysis of its parameter dependence.

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Year:  2009        PMID: 19862611      PMCID: PMC2940040          DOI: 10.1007/s10827-009-0195-x

Source DB:  PubMed          Journal:  J Comput Neurosci        ISSN: 0929-5313            Impact factor:   1.621


  54 in total

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6.  Measurement of variability dynamics in cortical spike trains.

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Authors:  Sven Schrader; Sonja Grün; Markus Diesmann; George L Gerstein
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8.  Spike synchronization and rate modulation differentially involved in motor cortical function.

Authors:  A Riehle; S Grün; M Diesmann; A Aertsen
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9.  Representation of cooperative firing activity among simultaneously recorded neurons.

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  26 in total

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2.  Emergent spike patterns in neuronal populations.

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Review 3.  On the Application of Multivariate Statistical and Data Mining Analyses to Data in Neuroscience.

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4.  State-space analysis of time-varying higher-order spike correlation for multiple neural spike train data.

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5.  A new method to infer higher-order spike correlations from membrane potentials.

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6.  Statistical evaluation of synchronous spike patterns extracted by frequent item set mining.

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8.  A maximum entropy test for evaluating higher-order correlations in spike counts.

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9.  Efficient identification of assembly neurons within massively parallel spike trains.

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10.  The relevance of network micro-structure for neural dynamics.

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