Literature DB >> 18219568

NeuroXidence: reliable and efficient analysis of an excess or deficiency of joint-spike events.

Gordon Pipa1, Diek W Wheeler, Wolf Singer, Danko Nikolić.   

Abstract

We present a non-parametric and computationally efficient method named NeuroXidence that detects coordinated firing of two or more neurons and tests whether the observed level of coordinated firing is significantly different from that expected by chance. The method considers the full auto-structure of the data, including the changes in the rate responses and the history dependencies in the spiking activity. Also, the method accounts for trial-by-trial variability in the dataset, such as the variability of the rate responses and their latencies. NeuroXidence can be applied to short data windows lasting only tens of milliseconds, which enables the tracking of transient neuronal states correlated to information processing. We demonstrate, on both simulated data and single-unit activity recorded in cat visual cortex, that NeuroXidence discriminates reliably between significant and spurious events that occur by chance.

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Year:  2008        PMID: 18219568      PMCID: PMC2758673          DOI: 10.1007/s10827-007-0065-3

Source DB:  PubMed          Journal:  J Comput Neurosci        ISSN: 0929-5313            Impact factor:   1.621


  57 in total

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2.  Rate limitations of unitary event analysis.

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3.  Cooperation between area 17 neuron pairs enhances fine discrimination of orientation.

Authors:  Jason M Samonds; John D Allison; Heather A Brown; A B Bonds
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Journal:  Nat Neurosci       Date:  2004-05       Impact factor: 24.884

5.  Time course of neural responses discriminating different views of the face and head.

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6.  Analyzing functional connectivity using a network likelihood model of ensemble neural spiking activity.

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Authors:  Elad Schneidman; Michael J Berry; Ronen Segev; William Bialek
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8.  A method for the quantification of synchrony and oscillatory properties of neuronal activity.

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Journal:  J Neurosci Methods       Date:  1994-09       Impact factor: 2.390

9.  Sustained and transient oscillatory responses in the gamma and beta bands in a visual short-term memory task in humans.

Authors:  C Tallon-Baudry; A Kreiter; O Bertrand
Journal:  Vis Neurosci       Date:  1999 May-Jun       Impact factor: 3.241

10.  A quantitative study of gamma-band activity in human intracranial recordings triggered by visual stimuli.

Authors:  J P Lachaux; E Rodriguez; J Martinerie; C Adam; D Hasboun; F J Varela
Journal:  Eur J Neurosci       Date:  2000-07       Impact factor: 3.386

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  32 in total

1.  Neural coding properties based on spike timing and pattern correlation of retinal ganglion cells.

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Journal:  Cogn Neurodyn       Date:  2010-06-29       Impact factor: 5.082

Review 2.  Data-driven significance estimation for precise spike correlation.

Authors:  Sonja Grün
Journal:  J Neurophysiol       Date:  2009-01-07       Impact factor: 2.714

3.  Feed-forward information and zero-lag synchronization in the sensory thalamocortical circuit are modulated during stimulus perception.

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Journal:  Proc Natl Acad Sci U S A       Date:  2019-03-25       Impact factor: 11.205

4.  Synchronous Spike Patterns in Macaque Motor Cortex during an Instructed-Delay Reach-to-Grasp Task.

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Journal:  J Neurosci       Date:  2016-08-10       Impact factor: 6.167

5.  Neural synchrony in cortical networks: history, concept and current status.

Authors:  Peter J Uhlhaas; Gordon Pipa; Bruss Lima; Lucia Melloni; Sergio Neuenschwander; Danko Nikolić; Wolf Singer
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6.  Distributed fading memory for stimulus properties in the primary visual cortex.

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7.  Distributed processing and temporal codes in neuronal networks.

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8.  Surrogate spike train generation through dithering in operational time.

Authors:  Sebastien Louis; George L Gerstein; Sonja Grün; Markus Diesmann
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9.  CuBIC: cumulant based inference of higher-order correlations in massively parallel spike trains.

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Journal:  J Comput Neurosci       Date:  2009-10-28       Impact factor: 1.621

10.  Efficient identification of assembly neurons within massively parallel spike trains.

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Journal:  Comput Intell Neurosci       Date:  2009-09-29
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