Literature DB >> 10618063

Polymorphism in the pertussis toxin promoter region affecting the DNA-based diagnosis of Bordetella infection.

M Nygren1, E Reizenstein, M Ronaghi, J Lundeberg.   

Abstract

The pertussis toxin (PT) promoter region is a frequently used target for DNA-based diagnosis of pertussis and parapertussis infections. The reported polymorphism in this region has also allowed discrimination of species in mixtures with several Bordetella species by their specific PCR amplicon restriction patterns. In the present study, we investigated the degree of polymorphism in order to confirm the reliability of the assay. Five different sequence types of the amplified 239- or 249-bp region were found among the 33 Bordetella pertussis, B. parapertussis, and B. bronchiseptica American Type Culture Collection reference strains and patient isolates analyzed. According to the sequences that were obtained and according to the PT promoter sequences already available in the databases, restriction enzyme analysis with TaqI, BglI, and HaeII, which gave four different patterns, can be performed to reliably identify B. pertussis, B. parapertussis, and B. bronchiseptica.

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Year:  2000        PMID： 10618063      PMCID： PMC86018          DOI： 10.1128/JCM.38.1.55-60.2000

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  45 in total

1.  Validation of nested Bordetella PCR in pertussis vaccine trial.

Authors:  E Reizenstein; L Lindberg; R Möllby; H O Hallander
Journal:  J Clin Microbiol       Date:  1996-04       Impact factor: 5.948

2.  PCR assay or culture for diagnosis of Bordetella pertussis in the routine diagnostic laboratory?

Authors:  A Erlandsson; A Bäckman; E Törnqvist; P Olcén; P Olsen
Journal:  J Infect       Date:  1997-11       Impact factor: 6.072

3.  Update of epidemiology, diagnosis, and treatment of pertussis.

Authors:  J E Hoppe
Journal:  Eur J Clin Microbiol Infect Dis       Date:  1996-03       Impact factor: 3.267

4.  Recommendations for use of the polymerase chain reaction in the diagnosis of Bordetella pertussis infections.

Authors:  B D Meade; A Bollen
Journal:  J Med Microbiol       Date:  1994-07       Impact factor: 2.472

5.  Identification of Bordetella pertussis in nasopharyngeal swabs using the polymerase chain reaction: evaluation of detection methods.

Authors:  R Lichtinghagen; R Diedrich-Glaubitz; B von Hörsten
Journal:  Eur J Clin Chem Clin Biochem       Date:  1994-03

6.  Synergistic binding of RNA polymerase and BvgA phosphate to the pertussis toxin promoter of Bordetella pertussis.

Authors:  P E Boucher; S Stibitz
Journal:  J Bacteriol       Date:  1995-11       Impact factor: 3.490

7.  Identification of Bordetella pertussis infection by shared-primer PCR.

Authors:  Z Li; D L Jansen; T M Finn; S A Halperin; A Kasina; S P O'Connor; T Aoyama; C R Manclark; M J Brennan
Journal:  J Clin Microbiol       Date:  1994-03       Impact factor: 5.948

8.  Comparison of polymerase chain reaction, culture, and western immunoblot serology for diagnosis of Bordetella pertussis infection.

Authors:  E Grimprel; P Bégué; I Anjak; F Betsou; N Guiso
Journal:  J Clin Microbiol       Date:  1993-10       Impact factor: 5.948

9.  A controlled trial of a two-component acellular, a five-component acellular, and a whole-cell pertussis vaccine.

Authors:  L Gustafsson; H O Hallander; P Olin; E Reizenstein; J Storsaeter
Journal:  N Engl J Med       Date:  1996-02-08       Impact factor: 91.245

10.  Diagnostic evaluation of polymerase chain reaction discriminative for Bordetella pertussis, B. parapertussis, and B. bronchiseptica.

Authors:  E Reizenstein; B Johansson; L Mardin; J Abens; R Möllby; H O Hallander
Journal:  Diagn Microbiol Infect Dis       Date:  1993-10       Impact factor: 2.803
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  14 in total

Review 1.  Pyrosequencing: sequence typing at the speed of light.

Authors:  Matthew A Diggle; Stuart C Clarke
Journal:  Mol Biotechnol       Date:  2004-10       Impact factor: 2.695

Review 2.  Towards improved accuracy of Bordetella pertussis nucleic acid amplification tests.

Authors:  Michael Loeffelholz
Journal:  J Clin Microbiol       Date:  2012-03-21       Impact factor: 5.948

3.  Real-time PCR assay targeting IS481 of Bordetella pertussis and molecular basis for detecting Bordetella holmesii.

Authors:  U Reischl; N Lehn; G N Sanden; M J Loeffelholz
Journal:  J Clin Microbiol       Date:  2001-05       Impact factor: 5.948

4.  Rapid-cycle PCR method to detect Bordetella pertussis that fulfills all consensus recommendations for use of PCR in diagnosis of pertussis.

Authors:  D J Farrell; M McKeon; G Daggard; M J Loeffelholz; C J Thompson; T K Mukkur
Journal:  J Clin Microbiol       Date:  2000-12       Impact factor: 5.948

Review 5.  Laboratory Diagnosis of Pertussis.

Authors:  Anneke van der Zee; Joop F P Schellekens; Frits R Mooi
Journal:  Clin Microbiol Rev       Date:  2015-10       Impact factor: 26.132

6.  Development and evaluation of a loop-mediated isothermal amplification method for rapid diagnosis of Bordetella pertussis infection.

Authors:  Kazunari Kamachi; Hiromi Toyoizumi-Ajisaka; Kohei Toda; Sann Chan Soeung; Svay Sarath; Ya Nareth; Yoshinobu Horiuchi; Kazunobu Kojima; Motohide Takahashi; Yoshichika Arakawa
Journal:  J Clin Microbiol       Date:  2006-05       Impact factor: 5.948

7.  Multitarget PCR for diagnosis of pertussis and its clinical implications.

Authors:  Xuan Qin; Emmanouil Galanakis; Emily T Martin; Janet A Englund
Journal:  J Clin Microbiol       Date:  2006-12-06       Impact factor: 5.948

8.  A Case of Bordetella brochiseptica at a Military Medical Facility in Hawai'i: Phenotypic and Molecular Testing of an Uncommon Human Pathogen.

Authors:  Michael A Washington; Willie A Agee; Lauren Kajiura; Joshua S Hawley-Molloy; Catherine M Staege; Jason C Barnhill
Journal:  Hawaii J Med Public Health       Date:  2015-07

9.  Evaluation of real-time PCR for detection of and discrimination between Bordetella pertussis, Bordetella parapertussis, and Bordetella holmesii for clinical diagnosis.

Authors:  Kate E Templeton; Sitha A Scheltinga; Anneke van der Zee; Bram M W Diederen; Alida M van Kruijssen; Herman Goossens; Ed Kuijper; Eric C J Claas
Journal:  J Clin Microbiol       Date:  2003-09       Impact factor: 5.948

10.  Evaluation of real-time PCR for diagnosis of Bordetella pertussis infection.

Authors:  Laina Knorr; Julie D Fox; Peter A G Tilley; Jasmine Ahmed-Bentley
Journal:  BMC Infect Dis       Date:  2006-03-23       Impact factor: 3.090
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