Literature DB >> 10592256

REBASE - restriction enzymes and methylases.

R J Roberts1, D Macelis.   

Abstract

REBASE is a comprehensive database of information about restriction enzymes and related proteins. It contains published and unpublished references, recognition and cleavage sites, isoschizomers, commercial availability, methylation sensitivity, crystal and sequence data. DNA methyltransferases, homing endonucleases, nicking enzymes, specificity subunits and control proteins are also included. Most recently, putative DNA methyltransferases and restriction enzymes, as predicted from analysis of genomic sequences, are also listed. The data is distributed via Email, ftp (ftp.neb.com), and the Web (http://rebase.neb.com).

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Year:  2000        PMID: 10592256      PMCID: PMC102482          DOI: 10.1093/nar/28.1.306

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  5 in total

1.  Characterization of the cloned BamHI restriction modification system: its nucleotide sequence, properties of the methylase, and expression in heterologous hosts.

Authors:  J E Brooks; P D Nathan; D Landry; L A Sznyter; P Waite-Rees; C L Ives; L S Moran; B E Slatko; J S Benner
Journal:  Nucleic Acids Res       Date:  1991-02-25       Impact factor: 16.971

2.  REBASE-restriction enzymes and methylases.

Authors:  R J Roberts; D Macelis
Journal:  Nucleic Acids Res       Date:  1999-01-01       Impact factor: 16.971

3.  Letter: A suggested nomenclature for bacterial host modification and restriction systems and their enzymes.

Authors:  H O Smith; D Nathans
Journal:  J Mol Biol       Date:  1973-12-15       Impact factor: 5.469

4.  Type II restriction endonucleases from Helicobacter pylori include an enzyme with a novel recognition sequence.

Authors:  A Ivic; K J Jakeman; C W Penn; N L Brown
Journal:  FEMS Microbiol Lett       Date:  1999-10-01       Impact factor: 2.742

5.  Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii.

Authors:  C J Bult; O White; G J Olsen; L Zhou; R D Fleischmann; G G Sutton; J A Blake; L M FitzGerald; R A Clayton; J D Gocayne; A R Kerlavage; B A Dougherty; J F Tomb; M D Adams; C I Reich; R Overbeek; E F Kirkness; K G Weinstock; J M Merrick; A Glodek; J L Scott; N S Geoghagen; J C Venter
Journal:  Science       Date:  1996-08-23       Impact factor: 47.728

  5 in total
  20 in total

1.  REBASE--restriction enzymes and methylases.

Authors:  R J Roberts; D Macelis
Journal:  Nucleic Acids Res       Date:  2001-01-01       Impact factor: 16.971

2.  Crystal structure of NaeI-an evolutionary bridge between DNA endonuclease and topoisomerase.

Authors:  Q Huai; J D Colandene; Y Chen; F Luo; Y Zhao; M D Topal; H Ke
Journal:  EMBO J       Date:  2000-06-15       Impact factor: 11.598

3.  OliI, a unique restriction endonuclease that recognizes the discontinuous sequence 5'-CACNN NGTG-3'.

Authors:  E Padegimiene; Z Maneliene; M Petruyte; A Janulaitis
Journal:  Nucleic Acids Res       Date:  2001-03-15       Impact factor: 16.971

Review 4.  Roles of DNA adenine methylation in regulating bacterial gene expression and virulence.

Authors:  D A Low; N J Weyand; M J Mahan
Journal:  Infect Immun       Date:  2001-12       Impact factor: 3.441

Review 5.  AdoMet-dependent methylation, DNA methyltransferases and base flipping.

Authors:  X Cheng; R J Roberts
Journal:  Nucleic Acids Res       Date:  2001-09-15       Impact factor: 16.971

Review 6.  Nucleoside triphosphate-dependent restriction enzymes.

Authors:  D T Dryden; N E Murray; D N Rao
Journal:  Nucleic Acids Res       Date:  2001-09-15       Impact factor: 16.971

7.  The nicking endonuclease N.BstNBI is closely related to type IIs restriction endonucleases MlyI and PleI.

Authors:  L S Higgins; C Besnier; H Kong
Journal:  Nucleic Acids Res       Date:  2001-06-15       Impact factor: 16.971

8.  Purification, crystallization, X-ray diffraction analysis and phasing of an engineered single-chain PvuII restriction endonuclease.

Authors:  Chrysi Meramveliotaki; Dina Kotsifaki; Maria Androulaki; Athanasios Hountas; Elias Eliopoulos; Michael Kokkinidis
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-09-19

9.  Changing the target base specificity of the EcoRV DNA methyltransferase by rational de novo protein-design.

Authors:  M Roth; A Jeltsch
Journal:  Nucleic Acids Res       Date:  2001-08-01       Impact factor: 16.971

10.  Characterization of BseMII, a new type IV restriction-modification system, which recognizes the pentanucleotide sequence 5'-CTCAG(N)(10/8)/.

Authors:  S Jurenaite-Urbanaviciene; R Kazlauskiene; V Urbelyte; Z Maneliene; M Petrusyte; A Lubys; A Janulaitis
Journal:  Nucleic Acids Res       Date:  2001-02-15       Impact factor: 16.971

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