Literature DB >> 17909283

Purification, crystallization, X-ray diffraction analysis and phasing of an engineered single-chain PvuII restriction endonuclease.

Chrysi Meramveliotaki1, Dina Kotsifaki, Maria Androulaki, Athanasios Hountas, Elias Eliopoulos, Michael Kokkinidis.   

Abstract

The restriction endonuclease PvuII from Proteus vulgaris has been converted from its wild-type homodimeric form into the enzymatically active single-chain variant scPvuII by tandemly joining the two subunits through the peptide linker Gly-Ser-Gly-Gly. scPvuII, which is suitable for the development of programmed restriction endonucleases for highly specific DNA cleavage, was purified and crystallized. The crystals diffract to a resolution of 2.35 A and belong to space group P4(2), with unit-cell parameters a = b = 101.92, c = 100.28 A and two molecules per asymmetric unit. Phasing was successfully performed by molecular replacement.

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Year:  2007        PMID: 17909283      PMCID: PMC2339719          DOI: 10.1107/S1744309107040377

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  20 in total

1.  REBASE - restriction enzymes and methylases.

Authors:  R J Roberts; D Macelis
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Covalent joining of the subunits of a homodimeric type II restriction endonuclease: single-chain PvuII endonuclease.

Authors:  A Simoncsits; M L Tjörnhammar; T Raskó; A Kiss; S Pongor
Journal:  J Mol Biol       Date:  2001-05-25       Impact factor: 5.469

3.  Complete nucleotide sequence of the PvuII restriction enzyme gene from Proteus vulgaris.

Authors:  A Athanasiadis; M Gregoriu; D Thanos; M Kokkinidis; J Papamatheakis
Journal:  Nucleic Acids Res       Date:  1990-11-11       Impact factor: 16.971

4.  Sequence and characterization of pvuIIR, the PvuII endonuclease gene, and of pvuIIC, its regulatory gene.

Authors:  T Tao; R M Blumenthal
Journal:  J Bacteriol       Date:  1992-05       Impact factor: 3.490

5.  A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.

Authors:  M M Bradford
Journal:  Anal Biochem       Date:  1976-05-07       Impact factor: 3.365

6.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

7.  Crystal structure of PvuII endonuclease reveals extensive structural homologies to EcoRV.

Authors:  A Athanasiadis; M Vlassi; D Kotsifaki; P A Tucker; K S Wilson; M Kokkinidis
Journal:  Nat Struct Biol       Date:  1994-07

8.  Two new restriction endonucleases from Proteus vulgaris.

Authors:  T R Gingeras; L Greenough; I Schildkraut; R J Roberts
Journal:  Nucleic Acids Res       Date:  1981-09-25       Impact factor: 16.971

9.  Cloning of a restriction-modification system from Proteus vulgaris and its use in analyzing a methylase-sensitive phenotype in Escherichia coli.

Authors:  R M Blumenthal; S A Gregory; J S Cooperider
Journal:  J Bacteriol       Date:  1985-11       Impact factor: 3.490

10.  Structure of PvuII endonuclease with cognate DNA.

Authors:  X Cheng; K Balendiran; I Schildkraut; J E Anderson
Journal:  EMBO J       Date:  1994-09-01       Impact factor: 11.598

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  1 in total

1.  Controlling the enzymatic activity of a restriction enzyme by light.

Authors:  Benno Schierling; Ann-Josée Noël; Wolfgang Wende; Le Thi Hien; Eugeny Volkov; Elena Kubareva; Tatiana Oretskaya; Michael Kokkinidis; Andreas Römpp; Bernhard Spengler; Alfred Pingoud
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-18       Impact factor: 11.205

  1 in total

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