Literature DB >> 10559183

An improved transposon for the halophilic archaeon Haloarcula hispanica.

W G Woods1, K Ngui, M L Dyall-Smith.   

Abstract

An improved transposon (ThD73) for Haloarcula hispanica is described. Based on the halobacterial insertion sequence ISH28, it showed little target sequence specificity but was biased toward a lower G+C content. Twenty randomly selected ThD73 mutants were analyzed, and the DNA flanking their insertions revealed several recognizable sequences, including two (unrelated) ISH elements.

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Year:  1999        PMID： 10559183      PMCID： PMC94192     

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  13 in total

1.  Revised nucleotide sequence of an archaeal insertion element (ISH28) reveals a putative transposase gene.

Authors:  W Woods; M Dyall-Smith
Journal:  Gene       Date:  1996-12-05       Impact factor: 3.688

2.  Transformation methods for halophilic archaebacteria.

Authors:  S W Cline; W L Lam; R L Charlebois; L C Schalkwyk; W F Doolittle
Journal:  Can J Microbiol       Date:  1989-01       Impact factor: 2.419

3.  IS231A insertion specificity: consensus sequence and DNA bending at the target site.

Authors:  B Hallet; R Rezsöhazy; J Mahillon; J Delcour
Journal:  Mol Microbiol       Date:  1994-10       Impact factor: 3.501

4.  ISH51: a large, degenerate family of insertion sequence-like elements in the genome of the archaebacterium, Halobacterium volcanii.

Authors:  J D Hofman; L C Schalkwyk; W F Doolittle
Journal:  Nucleic Acids Res       Date:  1986-09-11       Impact factor: 16.971

5.  Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors.

Authors:  C Yanisch-Perron; J Vieira; J Messing
Journal:  Gene       Date:  1985       Impact factor: 3.688

6.  Insertional mutagenesis of Listeria monocytogenes with a novel Tn917 derivative that allows direct cloning of DNA flanking transposon insertions.

Authors:  A Camilli; A Portnoy; P Youngman
Journal:  J Bacteriol       Date:  1990-07       Impact factor: 3.490

7.  Construction of composite transposons for halophilic Archaea.

Authors:  M L Dyall-Smith; W F Doolittle
Journal:  Can J Microbiol       Date:  1994-11       Impact factor: 2.419

8.  Snapshot of a large dynamic replicon in a halophilic archaeon: megaplasmid or minichromosome?

Authors:  W V Ng; S A Ciufo; T M Smith; R E Bumgarner; D Baskin; J Faust; B Hall; C Loretz; J Seto; J Slagel; L Hood; S DasSarma
Journal:  Genome Res       Date:  1998-11       Impact factor: 9.043

9.  Restoration of bacterioopsin gene expression in a revertant of Halobacterium halobium.

Authors:  F A Pfeifer; H W Boyer; M C Betlach
Journal:  J Bacteriol       Date:  1985-10       Impact factor: 3.490

10.  Shuttle vectors for the archaebacterium Halobacterium volcanii.

Authors:  W L Lam; W F Doolittle
Journal:  Proc Natl Acad Sci U S A       Date:  1989-07       Impact factor: 11.205
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  7 in total

Review 1.  Insertion sequence diversity in archaea.

Authors:  J Filée; P Siguier; M Chandler
Journal:  Microbiol Mol Biol Rev       Date:  2007-03       Impact factor: 11.056

2.  Transposon Insertion Mutagenesis in Hyperthermophilic Crenarchaeon Sulfolobus islandicus.

Authors:  Changyi Zhang; Rachel J Whitaker
Journal:  Methods Mol Biol       Date:  2022

3.  The complete genome sequence of Haloferax volcanii DS2, a model archaeon.

Authors:  Amber L Hartman; Cédric Norais; Jonathan H Badger; Stéphane Delmas; Sam Haldenby; Ramana Madupu; Jeffrey Robinson; Hoda Khouri; Qinghu Ren; Todd M Lowe; Julie Maupin-Furlow; Mecky Pohlschroder; Charles Daniels; Friedhelm Pfeiffer; Thorsten Allers; Jonathan A Eisen
Journal:  PLoS One       Date:  2010-03-19       Impact factor: 3.240

4.  Random mutagenesis of the hyperthermophilic archaeon Pyrococcus furiosus using in vitro mariner transposition and natural transformation.

Authors:  Natalia Guschinskaya; Romain Brunel; Maxime Tourte; Gina L Lipscomb; Michael W W Adams; Philippe Oger; Xavier Charpentier
Journal:  Sci Rep       Date:  2016-11-08       Impact factor: 4.379

5.  Characterisation of a highly stable alpha-amylase from the halophilic archaeon Haloarcula hispanica.

Authors:  George W Hutcheon; Nishi Vasisht; Albert Bolhuis
Journal:  Extremophiles       Date:  2005-08-02       Impact factor: 2.395

6.  Complete Genome Sequence of the Extremely Halophilic Archaeon Haloarcula hispanica Strain N601.

Authors:  Jiun-Yan Ding; Pei-Wen Chiang; Mei-Jhu Hong; Mike Dyall-Smith; Sen-Lin Tang
Journal:  Genome Announc       Date:  2014-03-13

7.  Generation of comprehensive transposon insertion mutant library for the model archaeon, Haloferax volcanii, and its use for gene discovery.

Authors:  Saija Kiljunen; Maria I Pajunen; Kieran Dilks; Stefanie Storf; Mechthild Pohlschroder; Harri Savilahti
Journal:  BMC Biol       Date:  2014-12-09       Impact factor: 7.431
  7 in total

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