Literature DB >> 10542186

Evidence of horizontal transfer of the EcoO109I restriction-modification gene to Escherichia coli chromosomal DNA.

K Kita1, J Tsuda, T Kato, K Okamoto, H Yanase, M Tanaka.   

Abstract

A DNA fragment carrying the genes coding for EcoO109I endonuclease and EcoO109I methylase, which recognize the nucleotide sequence 5'-(A/G)GGNCC(C/T)-3', was cloned from the chromosomal DNA of Escherichia coli H709c. The EcoO109I restriction-modification (R-M) system was found to be inserted between the int and psu genes from satellite bacteriophage P4, which were lysogenized in the chromosome at the P4 phage attachment site of the corresponding leuX gene observed in E. coli K-12 chromosomal DNA. The sid gene of the prophage was inactivated by insertion of one copy of IS21. These findings may shed light on the horizontal transfer and stable maintenance of the R-M system.

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Year:  1999        PMID: 10542186      PMCID: PMC94149     

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  38 in total

1.  Sequence comparison of the EcoHK31I and EaeI restriction-modification systems suggests an intergenic transfer of genetic material.

Authors:  K F Lee; P C Shaw; S J Picone; G G Wilson; K D Lunnen
Journal:  Biol Chem       Date:  1998 Apr-May       Impact factor: 3.915

Review 2.  Serology, chemistry, and genetics of O and K antigens of Escherichia coli.

Authors:  I Orskov; F Orskov; B Jann; K Jann
Journal:  Bacteriol Rev       Date:  1977-09

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Authors:  H W Boyer; D Roulland-Dussoix
Journal:  J Mol Biol       Date:  1969-05-14       Impact factor: 5.469

4.  DNA sequences of structural genes for Eco RI DNA restriction and modification enzymes.

Authors:  A K Newman; R A Rubin; S H Kim; P Modrich
Journal:  J Biol Chem       Date:  1981-03-10       Impact factor: 5.157

5.  Characterization of the genes coding for the Eco RV restriction and modification system of Escherichia coli.

Authors:  L Bougueleret; M Schwarzstein; A Tsugita; M Zabeau
Journal:  Nucleic Acids Res       Date:  1984-04-25       Impact factor: 16.971

6.  Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors.

Authors:  C Yanisch-Perron; J Vieira; J Messing
Journal:  Gene       Date:  1985       Impact factor: 3.688

7.  Restriction endonuclease EcoO109 from Escherichia coli H709c with heptanucleotide recognition site 5'-PuG/GNCCPy.

Authors:  K Mise; K Nakajima
Journal:  Gene       Date:  1985       Impact factor: 3.688

8.  Cloning and sequence analysis of the plasmid-borne genes encoding the Eco29kI restriction and modification enzymes.

Authors:  M V Zakharova; I V Beletskaya; A N Kravetz; A V Pertzev; S G Mayorov; M G Shlyapnikov; A S Solonin
Journal:  Gene       Date:  1998-02-27       Impact factor: 3.688

9.  Sequence from picomole quantities of proteins electroblotted onto polyvinylidene difluoride membranes.

Authors:  P Matsudaira
Journal:  J Biol Chem       Date:  1987-07-25       Impact factor: 5.157

10.  Determination of capsid size by satellite bacteriophage P4.

Authors:  D Shore; G Dehò; J Tsipis; R Goldstein
Journal:  Proc Natl Acad Sci U S A       Date:  1978-01       Impact factor: 11.205

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  24 in total

Review 1.  Behavior of restriction-modification systems as selfish mobile elements and their impact on genome evolution.

Authors:  I Kobayashi
Journal:  Nucleic Acids Res       Date:  2001-09-15       Impact factor: 16.971

2.  Distribution of the SsuDAT1I restriction-modification system among different serotypes of Streptococcus suis.

Authors:  T Sekizaki; M Osaki; D Takamatsu; Y Shimoji
Journal:  J Bacteriol       Date:  2001-09       Impact factor: 3.490

3.  C.EcoO109I, a regulatory protein for production of EcoO109I restriction endonuclease, specifically binds to and bends DNA upstream of its translational start site.

Authors:  Keiko Kita; Junko Tsuda; Shin-ya Nakai
Journal:  Nucleic Acids Res       Date:  2002-08-15       Impact factor: 16.971

4.  Crystallization and X-ray diffraction studies of DNA-free and DNA-bound forms of EcoO109I DNA methyltransferase.

Authors:  Makoto Iwamoto; Asami Hishiki; Takashi Shimada; Tsuyoshi Imasaki; Junko Tsuda; Keiko Kita; Toshiyuki Shimizu; Mamoru Sato; Hiroshi Hashimoto
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-10-29

5.  Molecular organization of intrinsic restriction and modification genes BsuM of Bacillus subtilis Marburg.

Authors:  Hideyuki Ohshima; Satoshi Matsuoka; Kei Asai; Yoshito Sadaie
Journal:  J Bacteriol       Date:  2002-01       Impact factor: 3.490

6.  Inference of the impact of insertion sequence (IS) elements on bacterial genome diversification through analysis of small-size structural polymorphisms in Escherichia coli O157 genomes.

Authors:  Tadasuke Ooka; Yoshitoshi Ogura; Md Asadulghani; Makoto Ohnishi; Keisuke Nakayama; Jun Terajima; Haruo Watanabe; Tetsuya Hayashi
Journal:  Genome Res       Date:  2009-06-29       Impact factor: 9.043

Review 7.  Bacteriophage orphan DNA methyltransferases: insights from their bacterial origin, function, and occurrence.

Authors:  James Murphy; Jennifer Mahony; Stuart Ainsworth; Arjen Nauta; Douwe van Sinderen
Journal:  Appl Environ Microbiol       Date:  2013-10-11       Impact factor: 4.792

Review 8.  Diverse functions of restriction-modification systems in addition to cellular defense.

Authors:  Kommireddy Vasu; Valakunja Nagaraja
Journal:  Microbiol Mol Biol Rev       Date:  2013-03       Impact factor: 11.056

9.  Evidence for horizontal transfer of the EcoT38I restriction-modification gene to chromosomal DNA by the P2 phage and diversity of defective P2 prophages in Escherichia coli TH38 strains.

Authors:  Keiko Kita; Hideaki Kawakami; Hiroaki Tanaka
Journal:  J Bacteriol       Date:  2003-04       Impact factor: 3.490

10.  Genome comparison and context analysis reveals putative mobile forms of restriction-modification systems and related rearrangements.

Authors:  Yoshikazu Furuta; Kentaro Abe; Ichizo Kobayashi
Journal:  Nucleic Acids Res       Date:  2010-01-12       Impact factor: 16.971

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