Literature DB >> 6788755

Nuclear magnetic resonance study on the microenvironments of histidine residues of ribonuclease T1 and carboxymethylated ribonuclease T1.

F Inagaki, Y Kawano, I Shimada, K Takahashi, T Miyazawa.   

Abstract

The 270-MHz 1H NMR spectra and fluorescence of ribonuclease T1 and carboxymethylated ribonuclease T1 were measured in aqueous solution. Histidine C4 proton resonances were assigned to individual residues. From the pH dependences of the chemical shifts of histidine C2 and C4 protons, the pKa values of histidine residues were obtained by the non-linear least-squares method. The hydrogen leads to deuterium exchange rates of histidine C2 protons were determined as a measure of the accessibility of histidine residues to the solvent. Each histidine residue of ribonuclease T1 was found to interact with a carboxylate group of an aspartic or glutamic acid residue; in particular, His-40 was shown to interact with Glu-58. Upon carboxymethylation of Glu-58, His-92 and His-27 are more shielded from the solvent while His-40 remains exposed to the solvent. The 67.9-MHz 13C NMR spectra were measured for the 13C-enriched preparation of carboxymethylated ribonuclease T1. From the pH dependence of 13C chemical shift, the pKa value of the carboxymethylated Glu-58 was found to be unusually low, suggesting the formation of an ionic or hydrogen bond between this carboxymethyl group and a positively charged group, possibly of Arg-77.

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Year:  1981        PMID: 6788755

Source DB:  PubMed          Journal:  J Biochem        ISSN: 0021-924X            Impact factor:   3.387


  11 in total

1.  Increasing protein stability by altering long-range coulombic interactions.

Authors:  G R Grimsley; K L Shaw; L R Fee; R W Alston; B M Huyghues-Despointes; R L Thurlkill; J M Scholtz; C N Pace
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2.  A self-consistent, microenvironment modulated screened coulomb potential approximation to calculate pH-dependent electrostatic effects in proteins.

Authors:  E L Mehler; F Guarnieri
Journal:  Biophys J       Date:  1999-07       Impact factor: 4.033

3.  Leucine 145 of the ribotoxin alpha-sarcin plays a key role for determining the specificity of the ribosome-inactivating activity of the protein.

Authors:  Manuel Masip; Lucía García-Ortega; Nieves Olmo; Maria Flor García-Mayoral; José Manuel Pérez-Cañadillas; Marta Bruix; Mercedes Oñaderra; Alvaro Martínez del Pozo; José G Gavilanes
Journal:  Protein Sci       Date:  2003-01       Impact factor: 6.725

4.  Picosecond time-resolved fluorescence of ribonuclease T1. A pH and substrate analogue binding study.

Authors:  L X Chen; J W Longworth; G R Fleming
Journal:  Biophys J       Date:  1987-06       Impact factor: 4.033

5.  Determination of pKa values of the histidine side chains of phosphatidylinositol-specific phospholipase C from Bacillus cereus by NMR spectroscopy and site-directed mutagenesis.

Authors:  T Liu; M Ryan; F W Dahlquist; O H Griffith
Journal:  Protein Sci       Date:  1997-09       Impact factor: 6.725

6.  Involvement of the amino-terminal beta-hairpin of the Aspergillus ribotoxins on the interaction with membranes and nonspecific ribonuclease activity.

Authors:  L García-Ortega; J Lacadena; J M Mancheño; M Oñaderra; R Kao; J Davies; N Olmo; J G Gavilanes
Journal:  Protein Sci       Date:  2001-08       Impact factor: 6.725

7.  Long dynamics simulations of proteins using atomistic force fields and a continuum representation of solvent effects: calculation of structural and dynamic properties.

Authors:  Xianfeng Li; Sergio A Hassan; Ernest L Mehler
Journal:  Proteins       Date:  2005-08-15

8.  Combining conformational flexibility and continuum electrostatics for calculating pK(a)s in proteins.

Authors:  Roxana E Georgescu; Emil G Alexov; Marilyn R Gunner
Journal:  Biophys J       Date:  2002-10       Impact factor: 4.033

9.  Substitution of histidine-137 by glutamine abolishes the catalytic activity of the ribosome-inactivating protein alpha-sarcin.

Authors:  J Lacadena; J M Mancheño; A Martinez-Ruiz; A Martínez del Pozo; M Gasset; M Oñaderra; J G Gavilanes
Journal:  Biochem J       Date:  1995-07-15       Impact factor: 3.857

Review 10.  Structure and function studies on enzymes with a catalytic carboxyl group(s): from ribonuclease T1 to carboxyl peptidases.

Authors:  Kenji Takahashi
Journal:  Proc Jpn Acad Ser B Phys Biol Sci       Date:  2013       Impact factor: 3.493

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