Literature DB >> 8759853

Atrazine chlorohydrolase from Pseudomonas sp. strain ADP: gene sequence, enzyme purification, and protein characterization.

M L de Souza1, M J Sadowsky, L P Wackett.   

Abstract

Pseudomonas sp. strain ADP metabolizes atrazine to carbon dioxide and ammonia via the intermediate hydroxyatrazine. The genetic potential to produce hydroxyatrazine was previously attributed to a 1.9-kb AvaI DNA fragment from strain ADP (M. L. de Souza, L. P. Wackett, K. L. Boundy-Mills, R. T. Mandelbaum, and M. J. Sadowsky, Appl. Environ. Microbiol. 61:3373-3378, 1995). In this study, sequence analysis of the 1.9-kb AvaI fragment indicated that a single open reading frame, atzA, encoded an activity transforming atrazine to hydroxyatrazine. The open reading frame for the chlorohydrolase was determined by sequencing to be 1,419 nucleotides and encodes a 473-amino-acid protein with a predicted subunit molecular weight of 52,421. The deduced amino acid sequence matched the first 10 amino acids determined by protein microsequencing. The protein AtzA was purified to homogeneity by ammonium sulfate precipitation and anion-exchange chromatography. The subunit and holoenzyme molecular weights were 60,000 and 245,000 as determined by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and gel filtration chromatography, respectively. The purified enzyme in H2(18)O yielded [18O]hydroxyatrazine, indicating that AtzA is a chlorohydrolase and not an oxygenase. The most related protein sequence in GenBank was that of TrzA, 41% identity, from Rhodococcus corallinus NRRL B-15444R. TrzA catalyzes the deamination of melamine and the dechlorination of deethylatrazine and desisopropylatrazine but is not active with atrazine. AtzA catalyzes the dechlorination of atrazine, simazine, and desethylatrazine but is not active with melamine, terbutylazine, or desethyldesisopropylatrazine. Our results indicate that AtzA is a novel atrazine-dechlorinating enzyme with fairly restricted substrate specificity and contributes to the microbial hydrolysis of atrazine to hydroxyatrazine in soils and groundwater.

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Year:  1996        PMID: 8759853      PMCID: PMC178272          DOI: 10.1128/jb.178.16.4894-4900.1996

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  23 in total

1.  Purification and properties of pentachlorophenol hydroxylase, a flavoprotein from Flavobacterium sp. strain ATCC 39723.

Authors:  L Xun; C S Orser
Journal:  J Bacteriol       Date:  1991-07       Impact factor: 3.490

2.  Cloning and comparison of the DNA encoding ammelide aminohydrolase and cyanuric acid amidohydrolase from three s-triazine-degrading bacterial strains.

Authors:  R W Eaton; J S Karns
Journal:  J Bacteriol       Date:  1991-02       Impact factor: 3.490

3.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

4.  Computer methods to locate signals in nucleic acid sequences.

Authors:  R Staden
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

5.  Atrazine metabolism in resistant corn and sorghum.

Authors:  R H Shimabukuro
Journal:  Plant Physiol       Date:  1968-12       Impact factor: 8.340

6.  Cloning of the genes for degradation of the herbicides EPTC (S-ethyl dipropylthiocarbamate) and atrazine from Rhodococcus sp. strain TE1.

Authors:  Z Q Shao; R Behki
Journal:  Appl Environ Microbiol       Date:  1995-05       Impact factor: 4.792

7.  A single cytochrome P-450 system is involved in degradation of the herbicides EPTC (S-ethyl dipropylthiocarbamate) and atrazine by Rhodococcus sp. strain NI86/21.

Authors:  I Nagy; F Compernolle; K Ghys; J Vanderleyden; R De Mot
Journal:  Appl Environ Microbiol       Date:  1995-05       Impact factor: 4.792

8.  Cloning and expression of the s-triazine hydrolase gene (trzA) from Rhodococcus corallinus and development of Rhodococcus recombinant strains capable of dealkylating and dechlorinating the herbicide atrazine.

Authors:  Z Q Shao; W Seffens; W Mulbry; R M Behki
Journal:  J Bacteriol       Date:  1995-10       Impact factor: 3.490

9.  Isolation and Characterization of a Pseudomonas sp. That Mineralizes the s-Triazine Herbicide Atrazine.

Authors:  R T Mandelbaum; D L Allan; L P Wackett
Journal:  Appl Environ Microbiol       Date:  1995-04       Impact factor: 4.792

10.  Degradation and mineralization of atrazine by a soil bacterial isolate.

Authors:  M Radosevich; S J Traina; Y L Hao; O H Tuovinen
Journal:  Appl Environ Microbiol       Date:  1995-01       Impact factor: 4.792

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  49 in total

1.  X-ray structure of the amidase domain of AtzF, the allophanate hydrolase from the cyanuric acid-mineralizing multienzyme complex.

Authors:  Sahil Balotra; Janet Newman; Nathan P Cowieson; Nigel G French; Peter M Campbell; Lyndall J Briggs; Andrew C Warden; Christopher J Easton; Thomas S Peat; Colin Scott
Journal:  Appl Environ Microbiol       Date:  2014-10-31       Impact factor: 4.792

2.  Melamine deaminase and atrazine chlorohydrolase: 98 percent identical but functionally different.

Authors:  J L Seffernick; M L de Souza; M J Sadowsky; L P Wackett
Journal:  J Bacteriol       Date:  2001-04       Impact factor: 3.490

Review 3.  Evolution of catabolic pathways: Genomic insights into microbial s-triazine metabolism.

Authors:  N Shapir; E F Mongodin; M J Sadowsky; S C Daugherty; K E Nelson; L P Wackett
Journal:  J Bacteriol       Date:  2006-11-17       Impact factor: 3.490

4.  Catalytic improvement and evolution of atrazine chlorohydrolase.

Authors:  Colin Scott; Colin J Jackson; Chris W Coppin; Roslyn G Mourant; Margaret E Hilton; Tara D Sutherland; Robyn J Russell; John G Oakeshott
Journal:  Appl Environ Microbiol       Date:  2009-02-06       Impact factor: 4.792

Review 5.  Expanding the enzyme universe: accessing non-natural reactions by mechanism-guided directed evolution.

Authors:  Hans Renata; Z Jane Wang; Frances H Arnold
Journal:  Angew Chem Int Ed Engl       Date:  2015-02-03       Impact factor: 15.336

6.  Purification and characterization of 2,6-dichloro-p-hydroquinone chlorohydrolase from Flavobacterium sp. strain ATCC 39723.

Authors:  J Y Lee; L Xun
Journal:  J Bacteriol       Date:  1997-03       Impact factor: 3.490

7.  A new synthetic route to N-benzyl carboxamides through the reverse reaction of N-substituted formamide deformylase.

Authors:  Yoshiteru Hashimoto; Toshihide Sakashita; Hiroshi Fukatsu; Hiroyoshi Sato; Michihiko Kobayashi
Journal:  Appl Environ Microbiol       Date:  2013-10-11       Impact factor: 4.792

8.  Biodegradation of atrazine by Agrobacterium radiobacter J14a and use of this strain in bioremediation of contaminated soil.

Authors:  J K Struthers; K Jayachandran; T B Moorman
Journal:  Appl Environ Microbiol       Date:  1998-09       Impact factor: 4.792

9.  Enzymatic degradation of chlorodiamino-s-triazine.

Authors:  Jennifer L Seffernick; Nir Shapir; Michael Schoeb; Gilbert Johnson; Michael J Sadowsky; Lawrence P Wackett
Journal:  Appl Environ Microbiol       Date:  2002-09       Impact factor: 4.792

10.  Dechlorination of Atrazine by a Rhizobium sp. Isolate.

Authors:  C Bouquard; J Ouazzani; J Prome; Y Michel-Briand; P Plesiat
Journal:  Appl Environ Microbiol       Date:  1997-03       Impact factor: 4.792

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