Literature DB >> 24039269

Expanding the cyanuric acid hydrolase protein family to the fungal kingdom.

Anthony G Dodge1, Chelsea S Preiner, Lawrence P Wackett.   

Abstract

The known enzymes that open the s-triazine ring, the cyanuric acid hydrolases, have been confined almost exclusively to the kingdom Bacteria and are all homologous members of the rare cyanuric acid hydrolase/barbiturase protein family. In the present study, a filamentous fungus, Sarocladium sp. strain CA, was isolated from soil by enrichment culturing using cyanuric acid as the sole source of nitrogen. A reverse-genetic approach identified a fungal cyanuric acid hydrolase gene composed of two exons and one intron. The translated spliced sequence was 39 to 53% identical to previously characterized bacterial cyanuric acid hydrolases. The sequence was used to generate a gene optimized for expression in Escherichia coli and encoding an N-terminally histidine-tagged protein. The protein was purified by nickel affinity and anion-exchange chromatography. The purified protein was shown by (13)C nuclear magnetic resonance ((13)C-NMR) to produce carboxybiuret as the product, which spontaneously decarboxylated to yield biuret and carbon dioxide. The protein was very narrow in substrate specificity, showing activity only with cyanuric acid and N-methyl cyanuric acid. Barbituric acid was an inhibitor of enzyme activity. Sequence analysis identified genes with introns in other fungi from the Ascomycota that, if spliced, are predicted to encode proteins with cyanuric acid hydrolase activity. The Ascomycota cyanuric acid hydrolase homologs are most closely related to cyanuric acid hydrolases from Actinobacteria.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 24039269      PMCID: PMC3837953          DOI: 10.1128/JB.00965-13

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  34 in total

1.  Modular stop and go extraction tips with stacked disks for parallel and multidimensional Peptide fractionation in proteomics.

Authors:  Yasushi Ishihama; Juri Rappsilber; Matthias Mann
Journal:  J Proteome Res       Date:  2006-04       Impact factor: 4.466

2.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

3.  Defining sequence space and reaction products within the cyanuric acid hydrolase (AtzD)/barbiturase protein family.

Authors:  Jennifer L Seffernick; Jasmine S Erickson; Stephan M Cameron; Seunghee Cho; Anthony G Dodge; Jack E Richman; Michael J Sadowsky; Lawrence P Wackett
Journal:  J Bacteriol       Date:  2012-06-22       Impact factor: 3.490

4.  Gene sequence and properties of an s-triazine ring-cleavage enzyme from Pseudomonas sp. strain NRRLB-12227.

Authors:  J S Karns
Journal:  Appl Environ Microbiol       Date:  1999-08       Impact factor: 4.792

5.  AtzC is a new member of the amidohydrolase protein superfamily and is homologous to other atrazine-metabolizing enzymes.

Authors:  M J Sadowsky; Z Tong; M de Souza; L P Wackett
Journal:  J Bacteriol       Date:  1998-01       Impact factor: 3.490

6.  Assessment of melamine and cyanuric acid toxicity in cats.

Authors:  Birgit Puschner; Robert H Poppenga; Linda J Lowenstine; Michael S Filigenzi; Patricia A Pesavento
Journal:  J Vet Diagn Invest       Date:  2007-11       Impact factor: 1.279

7.  Outbreaks of renal failure associated with melamine and cyanuric acid in dogs and cats in 2004 and 2007.

Authors:  Cathy A Brown; Kyu-Shik Jeong; Robert H Poppenga; Birgit Puschner; Doris M Miller; Angela E Ellis; Kyung-Il Kang; Steffen Sum; Alexis M Cistola; Scott A Brown
Journal:  J Vet Diagn Invest       Date:  2007-09       Impact factor: 1.279

8.  The mixed lineage nature of nitrogen transport and assimilation in marine eukaryotic phytoplankton: a case study of micromonas.

Authors:  Sarah M McDonald; Joshua N Plant; Alexandra Z Worden
Journal:  Mol Biol Evol       Date:  2010-05-09       Impact factor: 16.240

9.  On the origins of cyanuric acid hydrolase: purification, substrates, and prevalence of AtzD from Pseudomonas sp. strain ADP.

Authors:  Isaac Fruchey; Nir Shapir; Michael J Sadowsky; Lawrence P Wackett
Journal:  Appl Environ Microbiol       Date:  2003-06       Impact factor: 4.792

10.  Ring cleavage and degradative pathway of cyanuric acid in bacteria.

Authors:  A M Cook; P Beilstein; H Grossenbacher; R Hütter
Journal:  Biochem J       Date:  1985-10-01       Impact factor: 3.857

View more
  6 in total

Review 1.  Ancient Evolution and Recent Evolution Converge for the Biodegradation of Cyanuric Acid and Related Triazines.

Authors:  Jennifer L Seffernick; Lawrence P Wackett
Journal:  Appl Environ Microbiol       Date:  2016-01-04       Impact factor: 4.792

2.  Bacterial Cyanuric Acid Hydrolase for Water Treatment.

Authors:  Sujin Yeom; Baris R Mutlu; Alptekin Aksan; Lawrence P Wackett
Journal:  Appl Environ Microbiol       Date:  2015-07-17       Impact factor: 4.792

3.  High-Resolution X-Ray Structures of Two Functionally Distinct Members of the Cyclic Amide Hydrolase Family of Toblerone Fold Enzymes.

Authors:  Thomas S Peat; Sahil Balotra; Matthew Wilding; Carol J Hartley; Janet Newman; Colin Scott
Journal:  Appl Environ Microbiol       Date:  2017-04-17       Impact factor: 4.792

4.  Cyanuric Acid Biodegradation via Biuret: Physiology, Taxonomy, and Geospatial Distribution.

Authors:  Kelly G Aukema; Lambros J Tassoulas; Serina L Robinson; Jessica F Konopatski; Madison D Bygd; Lawrence P Wackett
Journal:  Appl Environ Microbiol       Date:  2020-01-07       Impact factor: 4.792

5.  Robustness of anaerobes exposed to cyanuric acid contaminated wastewater and achieving efficient removal via optimized co-digestion scheme.

Authors:  Kabir Abdullahi; Ahmed Elreedy; Manabu Fujii; Mona G Ibrahim; Ahmed Tawfik
Journal:  J Adv Res       Date:  2020-02-17       Impact factor: 10.479

6.  Cyanuric acid hydrolase from Azorhizobium caulinodans ORS 571: crystal structure and insights into a new class of Ser-Lys dyad proteins.

Authors:  Seunghee Cho; Ke Shi; Jennifer L Seffernick; Anthony G Dodge; Lawrence P Wackett; Hideki Aihara
Journal:  PLoS One       Date:  2014-06-10       Impact factor: 3.240

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.