Literature DB >> 10404220

EF-G-dependent GTP hydrolysis induces translocation accompanied by large conformational changes in the 70S ribosome.

R K Agrawal1, A B Heagle, P Penczek, R A Grassucci, J Frank.   

Abstract

Cryo-electron microscopy has been used to visualize elongation factor G (EF-G) on the 70S ribosome in GDP and GTP states. GTP hydrolysis is required for binding of all the domains of EF-G to the pretranslocational complex and for the completion of translocation. In addition, large conformational changes have been identified in the ribosome. The head of the 30S subunit shifts toward the L1 protein side, and the L7/L12 stalk becomes bifurcated upon EF-G binding. Upon GTP hydrolysis, the bifurcation is reversed and an arc-like connection is formed between the base of the stalk and EF-G.

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Year:  1999        PMID: 10404220     DOI: 10.1038/10695

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  84 in total

1.  Crystal structure of the ribosome recycling factor from Escherichia coli.

Authors:  K K Kim; K Min; S W Suh
Journal:  EMBO J       Date:  2000-05-15       Impact factor: 11.598

2.  Domain motions of EF-G bound to the 70S ribosome: insights from a hand-shaking between multi-resolution structures.

Authors:  W Wriggers; R K Agrawal; D L Drew; A McCammon; J Frank
Journal:  Biophys J       Date:  2000-09       Impact factor: 4.033

3.  Three-dimensional cryo-electron microscopy localization of EF2 in the Saccharomyces cerevisiae 80S ribosome at 17.5 A resolution.

Authors:  M G Gomez-Lorenzo; C M Spahn; R K Agrawal; R A Grassucci; P Penczek; K Chakraburtty; J P Ballesta; J L Lavandera; J F Garcia-Bustos; J Frank
Journal:  EMBO J       Date:  2000-06-01       Impact factor: 11.598

4.  Identifying conformational states of macromolecules by eigen-analysis of resampled cryo-EM images.

Authors:  Pawel A Penczek; Marek Kimmel; Christian M T Spahn
Journal:  Structure       Date:  2011-11-09       Impact factor: 5.006

5.  Cryo-EM reveals an active role for aminoacyl-tRNA in the accommodation process.

Authors:  Mikel Valle; Jayati Sengupta; Neil K Swami; Robert A Grassucci; Nils Burkhardt; Knud H Nierhaus; Rajendra K Agrawal; Joachim Frank
Journal:  EMBO J       Date:  2002-07-01       Impact factor: 11.598

Review 6.  Ribosomal protection proteins and their mechanism of tetracycline resistance.

Authors:  Sean R Connell; Dobryan M Tracz; Knud H Nierhaus; Diane E Taylor
Journal:  Antimicrob Agents Chemother       Date:  2003-12       Impact factor: 5.191

7.  Genetic evidence against the 16S ribosomal RNA helix 27 conformational switch model.

Authors:  Daniel Rodriguez-Correa; Albert E Dahlberg
Journal:  RNA       Date:  2004-01       Impact factor: 4.942

Review 8.  After the ribosome structure: how does translocation work?

Authors:  Simpson Joseph
Journal:  RNA       Date:  2003-02       Impact factor: 4.942

9.  Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits.

Authors:  Ning Gao; Andrey V Zavialov; Måns Ehrenberg; Joachim Frank
Journal:  J Mol Biol       Date:  2007-10-16       Impact factor: 5.469

Review 10.  Ribosomal translocation: one step closer to the molecular mechanism.

Authors:  Shinichiro Shoji; Sarah E Walker; Kurt Fredrick
Journal:  ACS Chem Biol       Date:  2009-02-20       Impact factor: 5.100

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