Literature DB >> 10400926

Physical and meiotic mapping of the region of human chromosome 4q11-q13 encompassing the vitamin D binding protein DBP/Gc-globulin and albumin multigene cluster.

Y H Song1, A K Naumova, S A Liebhaber, N E Cooke.   

Abstract

The vitamin D binding protein/Gc-globulin (DBP) gene is a member of a multigene cluster that includes albumin (ALB), alpha-fetoprotein (AFP), and alpha-albumin/afamin (AFM). All four genes have structural and functional similarities and map to the same chromosomal regions in humans (4q11-q13), mice, and rats. An accurate physical map of the region encompassing these genes is a prerequisite for study of their respective transcriptional regulation and identification of potential shared regulatory elements. By refining the physical and meiotic maps of the 4q11-q13 region and creating a local PAC contig, the order and transcriptional orientations of these four genes were determined to be centromere-3'-DBP-5'-5'-ALB-3'-5'-AFP-3'-5'-AFM3'-telomere. The ancestral DBP gene was separated from the ALB gene by >1.5 Mb. This organization and spacing establishes a foundation for ongoing functional studies in this region.

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Year:  1999        PMID: 10400926      PMCID: PMC310762     

Source DB:  PubMed          Journal:  Genome Res        ISSN: 1088-9051            Impact factor:   9.043


  22 in total

1.  The rat alpha 1-fetoprotein gene: characterization of the 5'-flanking region and tandem organization with the albumin gene.

Authors:  M Chevrette; M Guertin; B Turcotte; L Bélanger
Journal:  Nucleic Acids Res       Date:  1987-02-11       Impact factor: 16.971

2.  Structural origins of mammalian albumin.

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Journal:  Fed Proc       Date:  1976-08

3.  Amphibian albumins as members of the albumin, alpha-fetoprotein, vitamin D-binding protein multigene family.

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Journal:  J Mol Evol       Date:  1989-10       Impact factor: 2.395

Review 4.  Vitamin D binding protein (Gc-globulin).

Authors:  N E Cooke; J G Haddad
Journal:  Endocr Rev       Date:  1989-08       Impact factor: 19.871

5.  The rat vitamin D binding protein (Gc-globulin) gene. Structural analysis, functional and evolutionary correlations.

Authors:  K Ray; X K Wang; M Zhao; N E Cooke
Journal:  J Biol Chem       Date:  1991-04-05       Impact factor: 5.157

6.  Mapping of the locus for autosomal dominant amelogenesis imperfecta (AIH2) to a 4-Mb YAC contig on chromosome 4q11-q21.

Authors:  C Kärrman; B Bäckman; M Dixon; G Holmgren; K Forsman
Journal:  Genomics       Date:  1997-01-15       Impact factor: 5.736

7.  Tandem arrangement of the albumin and alpha-fetoprotein genes in the human genome.

Authors:  Y Urano; M Sakai; K Watanabe; T Tamaoki
Journal:  Gene       Date:  1984-12       Impact factor: 3.688

8.  Serum vitamin D-binding protein is a third member of the albumin and alpha fetoprotein gene family.

Authors:  N E Cooke; E V David
Journal:  J Clin Invest       Date:  1985-12       Impact factor: 14.808

9.  Human group-specific component (Gc) is a member of the albumin family.

Authors:  F Yang; J L Brune; S L Naylor; R L Cupples; K H Naberhaus; B H Bowman
Journal:  Proc Natl Acad Sci U S A       Date:  1985-12       Impact factor: 11.205

10.  Characterization of the human beta-thromboglobulin gene. Comparison with the gene for platelet factor 4.

Authors:  S Majumdar; D Gonder; B Koutsis; M Poncz
Journal:  J Biol Chem       Date:  1991-03-25       Impact factor: 5.157

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  13 in total

Review 1.  Current Controversies: Are Free Vitamin Metabolite Levels a More Accurate Assessment of Vitamin D Status than Total Levels?

Authors:  Daniel D Bikle; Sofie Malmstroem; Janice Schwartz
Journal:  Endocrinol Metab Clin North Am       Date:  2017-12       Impact factor: 4.741

2.  Role of CYP24A1, VDR and GC gene polymorphisms on deferasirox pharmacokinetics and clinical outcomes.

Authors:  S Allegra; J Cusato; S De Francia; A Arduino; F Longo; E Pirro; D Massano; A De Nicolò; A Piga; A D'Avolio
Journal:  Pharmacogenomics J       Date:  2017-11-21       Impact factor: 3.550

3.  The alpha-fetoprotein enhancer region activates the albumin and alpha-fetoprotein promoters during liver development.

Authors:  Lin Jin; Lingyun Long; Michael A Green; Brett T Spear
Journal:  Dev Biol       Date:  2009-09-24       Impact factor: 3.582

4.  An intronic locus control region plays an essential role in the establishment of an autonomous hepatic chromatin domain for the human vitamin D-binding protein gene.

Authors:  Tomoko Hiroki; Stephen A Liebhaber; Nancy E Cooke
Journal:  Mol Cell Biol       Date:  2007-09-04       Impact factor: 4.272

Review 5.  Alpha-fetoprotein: a renaissance.

Authors:  A A Terentiev; N T Moldogazieva
Journal:  Tumour Biol       Date:  2013-06-14

6.  The human vitamin D-binding protein gene contains locus control determinants sufficient for autonomous activation in hepatic chromatin.

Authors:  Tomoko Hiroki; Young-Han Song; Stephen A Liebhaber; Nancy E Cooke
Journal:  Nucleic Acids Res       Date:  2006-04-28       Impact factor: 16.971

7.  Transcriptomic analysis reveal the responses of dendritic cells to VDBP.

Authors:  Biwei Cao; Tao Wen; Meng Wei; Yuan Xiong; Wan Liu; Li Zhu; Jing Zhou
Journal:  Genes Genomics       Date:  2022-03-12       Impact factor: 2.164

8.  The DBP Phenotype Gc-1f/Gc-1f Is Associated with Reduced Risk of Cancer. The Tromsø Study.

Authors:  Rolf Jorde; Henrik Schirmer; Tom Wilsgaard; Ellisiv Bøgeberg Mathiesen; Inger Njølstad; Maja-Lisa Løchen; Ragnar Martin Joakimsen; Guri Grimnes
Journal:  PLoS One       Date:  2015-05-18       Impact factor: 3.240

Review 9.  Common variants of the vitamin D binding protein gene and adverse health outcomes.

Authors:  Suneil Malik; Lei Fu; David James Juras; Mohamed Karmali; Betty Y L Wong; Agnes Gozdzik; David E C Cole
Journal:  Crit Rev Clin Lab Sci       Date:  2013-02-22       Impact factor: 6.250

10.  Evolutionary journey of the Gc protein (vitamin D-binding protein) across vertebrates.

Authors:  Shaheena Anwar; Mohammed Perwaiz Iqbal; Shamshad Zarina; Zulfiqar A Bhutta
Journal:  Intrinsically Disord Proteins       Date:  2014-01-01
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