Literature DB >> 10339578

Adaptive evolution of color vision of the Comoran coelacanth (Latimeria chalumnae).

S Yokoyama1, H Zhang, F B Radlwimmer, N S Blow.   

Abstract

The coelacanth, a "living fossil," lives near the coast of the Comoros archipelago in the Indian Ocean. Living at a depth of about 200 m, the Comoran coelacanth receives only a narrow range of light, at about 480 nm. To detect the entire range of "color" at this depth, the coelacanth appears to use only two closely related paralogous RH1 and RH2 visual pigments with the optimum light sensitivities (lambdamax) at 478 nm and 485 nm, respectively. The lambdamax values are shifted about 20 nm toward blue compared with those of the corresponding orthologous pigments. Mutagenesis experiments show that each of these coadapted changes is fully explained by two amino acid replacements.

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Year:  1999        PMID: 10339578      PMCID: PMC26872          DOI: 10.1073/pnas.96.11.6279

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  23 in total

1.  Visual pigment of the coelacanth.

Authors:  H J Dartnall
Journal:  Nature       Date:  1972-10-06       Impact factor: 49.962

2.  The rapid generation of mutation data matrices from protein sequences.

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Journal:  Comput Appl Biosci       Date:  1992-06

3.  Is colour vision possible with only rods and blue-sensitive cones?

Authors:  A Reitner; L T Sharpe; E Zrenner
Journal:  Nature       Date:  1991-08-29       Impact factor: 49.962

4.  CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.

Authors:  Joseph Felsenstein
Journal:  Evolution       Date:  1985-07       Impact factor: 3.694

5.  Glutamic acid-113 serves as the retinylidene Schiff base counterion in bovine rhodopsin.

Authors:  T P Sakmar; R R Franke; H G Khorana
Journal:  Proc Natl Acad Sci U S A       Date:  1989-11       Impact factor: 11.205

6.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

7.  The molecular basis of visual excitation.

Authors:  G Wald
Journal:  Nature       Date:  1968-08-24       Impact factor: 49.962

8.  Retinal structure in Latimeria chalumnae.

Authors:  N A Locket
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1973-12-06       Impact factor: 6.237

9.  Molecular genetics of human color vision: the genes encoding blue, green, and red pigments.

Authors:  J Nathans; D Thomas; D S Hogness
Journal:  Science       Date:  1986-04-11       Impact factor: 47.728

10.  Some advances in coelacanth biology.

Authors:  N A Locket
Journal:  Proc R Soc Lond B Biol Sci       Date:  1980-07-17
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  45 in total

Review 1.  Visual and acoustic communication in non-human animals: a comparison.

Authors:  G G Rosenthal; M J Ryan
Journal:  J Biosci       Date:  2000-09       Impact factor: 1.826

2.  Salmonid opsin sequences undergo positive selection and indicate an alternate evolutionary relationship in oncorhynchus.

Authors:  Stephen G Dann; W Ted Allison; David B Levin; John S Taylor; Craig W Hawryshyn
Journal:  J Mol Evol       Date:  2004-04       Impact factor: 2.395

3.  Multiple Genetic Mechanisms Contribute to Visual Sensitivity Variation in the Labridae.

Authors:  Genevieve A C Phillips; Karen L Carleton; N Justin Marshall
Journal:  Mol Biol Evol       Date:  2015-10-12       Impact factor: 16.240

4.  Parallelism of amino acid changes at the RH1 affecting spectral sensitivity among deep-water cichlids from Lakes Tanganyika and Malawi.

Authors:  Tohru Sugawara; Yohey Terai; Hiroo Imai; George F Turner; Stephan Koblmüller; Christian Sturmbauer; Yoshinori Shichida; Norihiro Okada
Journal:  Proc Natl Acad Sci U S A       Date:  2005-04-04       Impact factor: 11.205

5.  Rod and cone opsin families differ in spectral tuning domains but not signal transducing domains as judged by saturated evolutionary trace analysis.

Authors:  Karen L Carleton; Tyrone C Spady; Rick H Cote
Journal:  J Mol Evol       Date:  2005-06-16       Impact factor: 2.395

6.  Modulation of the absorption maximum of rhodopsin by amino acids in the C-terminus.

Authors:  Shozo Yokoyama; Takashi Tada; Takahisa Yamato
Journal:  Photochem Photobiol       Date:  2007 Mar-Apr       Impact factor: 3.421

Review 7.  Mechanistic approaches to the study of evolution: the functional synthesis.

Authors:  Antony M Dean; Joseph W Thornton
Journal:  Nat Rev Genet       Date:  2007-09       Impact factor: 53.242

8.  Elucidation of phenotypic adaptations: Molecular analyses of dim-light vision proteins in vertebrates.

Authors:  Shozo Yokoyama; Takashi Tada; Huan Zhang; Lyle Britt
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-03       Impact factor: 11.205

9.  Population variation in opsin expression in the bluefin killifish, Lucania goodei: a real-time PCR study.

Authors:  R C Fuller; K L Carleton; J M Fadool; T C Spady; J Travis
Journal:  J Comp Physiol A Neuroethol Sens Neural Behav Physiol       Date:  2003-12-17       Impact factor: 1.836

10.  The evolutionary analysis of "orphans" from the Drosophila genome identifies rapidly diverging and incorrectly annotated genes.

Authors:  K J Schmid; C F Aquadro
Journal:  Genetics       Date:  2001-10       Impact factor: 4.562

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