Literature DB >> 16922606

Modulation of the absorption maximum of rhodopsin by amino acids in the C-terminus.

Shozo Yokoyama1, Takashi Tada, Takahisa Yamato.   

Abstract

Vision begins when light is absorbed by visual pigments. It is commonly believed that the absorption spectra of visual pigments are modulated by interactions between the retinal and amino acids within or near 4.5 angstroms of the retinal in the transmembrane (TM) segments. However, this dogma has not been rigorously tested. In this study, we show that the retinal-opsin interactions extend well beyond the retinal binding pocket. We found that, although it is positioned outside of TM segments, the C-terminus of the rhodopsin in the rockfish longspine thornyhead (Sebastolobus altivelis) modulates its lambda(max) by interacting mainly with the last TM segment. Our results illustrate how amino acids in the C-terminus are likely to interact with the retinal. We anticipate our analyses to be a starting point for viewing the spectral tuning of visual pigments as interactions between the retinal and key amino acids that are distributed throughout the entire pigment.

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Year:  2007        PMID: 16922606      PMCID: PMC2572076          DOI: 10.1562/2006-06-19-RA-939

Source DB:  PubMed          Journal:  Photochem Photobiol        ISSN: 0031-8655            Impact factor:   3.421


  36 in total

1.  Spectral tuning in the human blue cone pigment.

Authors:  J I Fasick; N Lee; D D Oprian
Journal:  Biochemistry       Date:  1999-09-07       Impact factor: 3.162

2.  Single-cysteine substitution mutants at amino acid positions 306-321 in rhodopsin, the sequence between the cytoplasmic end of helix VII and the palmitoylation sites: sulfhydryl reactivity and transducin activation reveal a tertiary structure.

Authors:  K Cai; J Klein-Seetharaman; D Farrens; C Zhang; C Altenbach; W L Hubbell; H G Khorana
Journal:  Biochemistry       Date:  1999-06-22       Impact factor: 3.162

3.  Stereochemical quality of protein structure coordinates.

Authors:  A L Morris; M W MacArthur; E G Hutchinson; J M Thornton
Journal:  Proteins       Date:  1992-04

4.  Mechanisms of spectral tuning in blue cone visual pigments. Visible and raman spectroscopy of blue-shifted rhodopsin mutants.

Authors:  S W Lin; G G Kochendoerfer; K S Carroll; D Wang; R A Mathies; T P Sakmar
Journal:  J Biol Chem       Date:  1998-09-18       Impact factor: 5.157

Review 5.  Molecular genetic basis of adaptive selection: examples from color vision in vertebrates.

Authors:  S Yokoyama
Journal:  Annu Rev Genet       Date:  1997       Impact factor: 16.830

6.  Mechanisms of spectral tuning in the mouse green cone pigment.

Authors:  H Sun; J P Macke; J Nathans
Journal:  Proc Natl Acad Sci U S A       Date:  1997-08-05       Impact factor: 11.205

7.  Adaptive evolution of color vision of the Comoran coelacanth (Latimeria chalumnae).

Authors:  S Yokoyama; H Zhang; F B Radlwimmer; N S Blow
Journal:  Proc Natl Acad Sci U S A       Date:  1999-05-25       Impact factor: 11.205

8.  Mechanism of spectral tuning in the dolphin visual pigments.

Authors:  J I Fasick; P R Robsinson
Journal:  Biochemistry       Date:  1998-01-13       Impact factor: 3.162

9.  Structure and function in rhodopsin: topology of the C-terminal polypeptide chain in relation to the cytoplasmic loops.

Authors:  K Cai; R Langen; W L Hubbell; H G Khorana
Journal:  Proc Natl Acad Sci U S A       Date:  1997-12-23       Impact factor: 11.205

10.  Spectral differentiation of blue opsins between phylogenetically close but ecologically distant goldfish and zebrafish.

Authors:  Akito Chinen; Yoshifumi Matsumoto; Shoji Kawamura
Journal:  J Biol Chem       Date:  2004-12-28       Impact factor: 5.157

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  4 in total

1.  Elucidation of phenotypic adaptations: Molecular analyses of dim-light vision proteins in vertebrates.

Authors:  Shozo Yokoyama; Takashi Tada; Huan Zhang; Lyle Britt
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-03       Impact factor: 11.205

2.  Molecular mechanism of long-range synergetic color tuning between multiple amino acid residues in conger rhodopsin.

Authors:  Hiroshi C Watanabe; Yoshiharu Mori; Takashi Tada; Shozo Yokoyama; Takahisa Yamato
Journal:  Biophysics (Oxf)       Date:  2010-01-01

3.  Rhodopsin in the Dark Hot Sea: Molecular Analysis of Rhodopsin in a Snailfish, Careproctus rhodomelas, Living near the Deep-Sea Hydrothermal Vent.

Authors:  Rie Sakata; Ryo Kabutomori; Keiko Okano; Hiromasa Mitsui; Akihiro Takemura; Tetsuya Miwa; Hiroyuki Yamamoto; Toshiyuki Okano
Journal:  PLoS One       Date:  2015-08-14       Impact factor: 3.240

4.  An EvoDevo Study of Salmonid Visual Opsin Dynamics and Photopigment Spectral Sensitivity.

Authors:  Mariann Eilertsen; Wayne Iwan Lee Davies; Dharmeshkumar Patel; Jonathan E Barnes; Rita Karlsen; Jessica Kate Mountford; Deborah L Stenkamp; Jagdish Suresh Patel; Jon Vidar Helvik
Journal:  Front Neuroanat       Date:  2022-07-11       Impact factor: 3.543

  4 in total

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