Literature DB >> 17703238

Mechanistic approaches to the study of evolution: the functional synthesis.

Antony M Dean1, Joseph W Thornton.   

Abstract

An emerging synthesis of evolutionary biology and experimental molecular biology is providing much stronger and deeper inferences about the dynamics and mechanisms of evolution than were possible in the past. The new approach combines statistical analyses of gene sequences with manipulative molecular experiments to reveal how ancient mutations altered biochemical processes and produced novel phenotypes. This functional synthesis has set the stage for major advances in our understanding of fundamental questions in evolutionary biology. Here we describe this emerging approach, highlight important new insights that it has made possible, and suggest future directions for the field.

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Year:  2007        PMID: 17703238      PMCID: PMC2488205          DOI: 10.1038/nrg2160

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  105 in total

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4.  Crystal structure of an ancient protein: evolution by conformational epistasis.

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Journal:  Science       Date:  2007-08-16       Impact factor: 47.728

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Journal:  J Biol Chem       Date:  1999-01-22       Impact factor: 5.157

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Authors:  S J Gould; R C Lewontin
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9.  The genetic basis of adaptive melanism in pocket mice.

Authors:  Michael W Nachman; Hopi E Hoekstra; Susan L D'Agostino
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-18       Impact factor: 11.205

10.  Adaptive variation in beach mice produced by two interacting pigmentation genes.

Authors:  Cynthia C Steiner; Jesse N Weber; Hopi E Hoekstra
Journal:  PLoS Biol       Date:  2007-09       Impact factor: 8.029

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  161 in total

1.  The evolution of multimeric protein assemblages.

Authors:  Michael Lynch
Journal:  Mol Biol Evol       Date:  2011-12-05       Impact factor: 16.240

Review 2.  Molecular spandrels: tests of adaptation at the genetic level.

Authors:  Rowan D H Barrett; Hopi E Hoekstra
Journal:  Nat Rev Genet       Date:  2011-10-18       Impact factor: 53.242

Review 3.  Mutational effects and the evolution of new protein functions.

Authors:  Misha Soskine; Dan S Tawfik
Journal:  Nat Rev Genet       Date:  2010-08       Impact factor: 53.242

4.  Experimental evolution of adenylate kinase reveals contrasting strategies toward protein thermostability.

Authors:  Corwin Miller; Milya Davlieva; Corey Wilson; Kristopher I White; Rafael Couñago; Gang Wu; Jeffrey C Myers; Pernilla Wittung-Stafshede; Yousif Shamoo
Journal:  Biophys J       Date:  2010-08-04       Impact factor: 4.033

5.  11-deoxycortisol is a corticosteroid hormone in the lamprey.

Authors:  David A Close; Sang-Seon Yun; Stephen D McCormick; Andrew J Wildbill; Weiming Li
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-19       Impact factor: 11.205

6.  The rate of establishment of complex adaptations.

Authors:  Michael Lynch; Adam Abegg
Journal:  Mol Biol Evol       Date:  2010-01-29       Impact factor: 16.240

7.  Evolution: Revenge of the hopeful monster.

Authors:  Tanguy Chouard
Journal:  Nature       Date:  2010-02-18       Impact factor: 49.962

8.  The future of molecular evolution.

Authors:  Antony M Dean
Journal:  EMBO Rep       Date:  2010-06       Impact factor: 8.807

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Authors:  Matthew I Peña; Elizabeth Van Itallie; Matthew R Bennett; Yousif Shamoo
Journal:  Chaos       Date:  2010-06       Impact factor: 3.642

10.  Integrating evolutionary and functional approaches to infer adaptation at specific loci.

Authors:  Jay F Storz; Christopher W Wheat
Journal:  Evolution       Date:  2010-09       Impact factor: 3.694

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