Literature DB >> 9925625

Phylogenetic diversity of symbiotic methanogens living in the hindgut of the lower termite Reticulitermes speratus analyzed by PCR and in situ hybridization.

N Shinzato1, T Matsumoto, I Yamaoka, T Oshima, A Yamagishi.   

Abstract

A phylogenetic analysis of the sequences of 60 clones of archaeal small-subunit rRNA genes amplified from the termite Reticulitermes speratus revealed that most of them (56 clones) clustered in the genus Methanobrevibacter. Three clones were classified in the order Thermoplasmales. The Methanobrevibacter-related symbionts were detected by in situ hybridization analysis.

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Year:  1999        PMID： 9925625      PMCID： PMC91104     

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  9 in total

1.  A simple and efficient method for direct cloning of PCR products using ddT-tailed vectors.

Authors:  T A Holton; M W Graham
Journal:  Nucleic Acids Res       Date:  1991-03-11       Impact factor: 16.971

2.  Archaea in coastal marine environments.

Authors:  E F DeLong
Journal:  Proc Natl Acad Sci U S A       Date:  1992-06-15       Impact factor: 11.205

3.  Phylogenetic diversity of subsurface marine microbial communities from the Atlantic and Pacific Oceans.

Authors:  J A Fuhrman; K McCallum; A A Davis
Journal:  Appl Environ Microbiol       Date:  1993-05       Impact factor: 4.792

4.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

5.  Phylogeny of symbiotic methanogens in the gut of the termite Reticulitermes speratus.

Authors:  M Ohkuma; S Noda; K Horikoshi; T Kudo
Journal:  FEMS Microbiol Lett       Date:  1995-12-01       Impact factor: 2.742

6.  High abundance of Archaea in Antarctic marine picoplankton.

Authors:  E F DeLong; K Y Wu; B B Prézelin; R V Jovine
Journal:  Nature       Date:  1994-10-20       Impact factor: 49.962

7.  Effect of chemical treatments on methane emission by the hindgut microbiota in the termiteZootermopsis angusticollis.

Authors:  A C Messer; M J Lee
Journal:  Microb Ecol       Date:  1989-11       Impact factor: 4.552

8.  Physiological ecology of Methanobrevibacter cuticularis sp. nov. and Methanobrevibacter curvatus sp. nov., isolated from the hindgut of the termite Reticulitermes flavipes.

Authors:  J R Leadbetter; J A Breznak
Journal:  Appl Environ Microbiol       Date:  1996-10       Impact factor: 4.792

9.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205
  9 in total
  16 in total

1.  Axial differences in community structure of Crenarchaeota and Euryarchaeota in the highly compartmentalized gut of the soil-feeding termite Cubitermes orthognathus.

Authors:  M W Friedrich; D Schmitt-Wagner; T Lueders; A Brune
Journal:  Appl Environ Microbiol       Date:  2001-10       Impact factor: 4.792

2.  Molecular diversity of rumen methanogens from sheep in Western Australia.

Authors:  André-Denis G Wright; Andrew J Williams; Barbara Winder; Claus T Christophersen; Sharon L Rodgers; Kellie D Smith
Journal:  Appl Environ Microbiol       Date:  2004-03       Impact factor: 4.792

3.  Development of temporal temperature gradient electrophoresis for characterising methanogen diversity.

Authors:  Julie Earl; Roger W Pickup; Donald A Ritchie; Clive Edwards
Journal:  Microb Ecol       Date:  2005-11-24       Impact factor: 4.552

4.  Identification and quantification of methanogenic Archaea in adult chicken ceca.

Authors:  Suwat Saengkerdsub; Robin C Anderson; Heather H Wilkinson; Woo-Kyun Kim; David J Nisbet; Steven C Ricke
Journal:  Appl Environ Microbiol       Date:  2006-11-03       Impact factor: 4.792

5.  Isolation of polymer-degrading bacteria and characterization of the hindgut bacterial community from the detritus-feeding larvae of Tipula abdominalis (Diptera: Tipulidae).

Authors:  Dana M Cook; Emily DeCrescenzo Henriksen; Rima Upchurch; Joy B Doran Peterson
Journal:  Appl Environ Microbiol       Date:  2007-07-13       Impact factor: 4.792

6.  Diversity of bovine rumen methanogens In vitro in the presence of condensed tannins, as determined by sequence analysis of 16S rRNA gene library.

Authors:  Hui Yin Tan; Chin Chin Sieo; Chin Mei Lee; Norhani Abdullah; Juan Boo Liang; Yin Wan Ho
Journal:  J Microbiol       Date:  2011-06-30       Impact factor: 3.422

7.  "Methanoplasmatales," Thermoplasmatales-related archaea in termite guts and other environments, are the seventh order of methanogens.

Authors:  Kristina Paul; James O Nonoh; Lena Mikulski; Andreas Brune
Journal:  Appl Environ Microbiol       Date:  2012-09-21       Impact factor: 4.792

8.  Phylogenetic diversity of nitrogen fixation genes in the symbiotic microbial community in the gut of diverse termites.

Authors:  M Ohkuma; S Noda; T Kudo
Journal:  Appl Environ Microbiol       Date:  1999-11       Impact factor: 4.792

9.  Phylogenetic position and in situ identification of ectosymbiotic spirochetes on protists in the termite gut.

Authors:  Satoko Noda; Moriya Ohkuma; Akinori Yamada; Yuichi Hongoh; Toshiaki Kudo
Journal:  Appl Environ Microbiol       Date:  2003-01       Impact factor: 4.792

10.  Complex coevolutionary history of symbiotic Bacteroidales bacteria of various protists in the gut of termites.

Authors:  Satoko Noda; Yuichi Hongoh; Tomoyuki Sato; Moriya Ohkuma
Journal:  BMC Evol Biol       Date:  2009-07-09       Impact factor: 3.260
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