Literature DB >> 9890879

His68 and His141 are critical contributors to the intersubunit catalytic site of adenylosuccinate lyase of Bacillus subtilis.

T T Lee1, C Worby, Z Q Bao, J E Dixon, R F Colman.   

Abstract

Mutant adenylosuccinate lyases of Bacillus subtilis were prepared by site-directed mutagenesis with replacements for His141, previously identified by affinity labeling as being in the active site [Lee, T. T., Worby, C., Dixon, J. E., and Colman, R. F. (1997) J. Biol. Chem. 272, 458-465]. Four substitutions (A, L, E, Q) yield mutant enzyme with no detectable catalytic activity, while the H141R mutant is about 10(-)5 as active as the wild-type enzyme. Kinetic studies show, for the H141R enzyme, a Km that is only 3 times that of the wild-type enzyme. Minimal activity was also observed for mutant enzymes with replacements for His68 [Lee, T. T., Worby, C., Bao, Z. -Q., Dixon, J. E., and Colman, R. F. (1998) Biochemistry 37, 8481-8489]. Measurement of the reversible binding of radioactive adenylosuccinate by inactive mutant enzymes with substitutions at either position 68 or 141 shows that their affinities for substrate are decreased by only 10-40-fold. These results suggest that His141, like His68, plays an important role in catalysis, but not in substrate binding. Evidence is consistent with the hypothesis that His141 and His68 function, respectively, as the catalytic base and acid. Circular dichroism spectroscopy and gel filtration chromatography conducted on wild-type and all His141 and His68 mutants reveal that none of the mutant enzymes exhibits major structural changes and that all the enzymes are tetramers. Mixing inactive His141 with inactive His68 mutant enzymes leads to striking increases in catalytic activity. This complementation of mutant enzymes indicates that His141 and His68 come from different subunits to form the active site. A tetrameric structure of adenylosuccinate lyase was constructed by homology modeling based on the known structures in the fumarase superfamily, including argininosuccinate lyase, delta-crystallin, fumarase, and aspartase. The model suggests that each active site is constituted by residues from three subunits, and that His141 and His68 come from two different subunits.

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Year:  1999        PMID: 9890879     DOI: 10.1021/bi982299s

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  11 in total

1.  In vitro hybridization and separation of hybrids of human adenylosuccinate lyase from wild-type and disease-associated mutant enzymes.

Authors:  Lushanti De Zoysa Ariyananda; Christina Antonopoulos; Jenna Currier; Roberta F Colman
Journal:  Biochemistry       Date:  2011-02-03       Impact factor: 3.162

2.  Molecular cloning, characterization and expression analysis of adenylosuccinate lyase gene in grass carp (Ctenopharyngodon idella).

Authors:  Tian Yuan; Ji-Rui Gu; Wen-Bo Gu; Jiang Wu; Shao-Rong Ge; Heng Xu
Journal:  Mol Biol Rep       Date:  2010-09-21       Impact factor: 2.316

3.  Important roles of hydroxylic amino acid residues in the function of Bacillus subtilis adenylosuccinate lyase.

Authors:  Mark L Segall; Meghan A Cashman; Roberta F Colman
Journal:  Protein Sci       Date:  2007-03       Impact factor: 6.725

4.  The characterization of mutant Bacillus subtilis adenylosuccinate lyases corresponding to severe human adenylosuccinate lyase deficiencies.

Authors:  Jennifer Brosius Palenchar; Jennifer M Crocco; Roberta F Colman
Journal:  Protein Sci       Date:  2003-08       Impact factor: 6.725

5.  Effect of a new non-cleavable substrate analog on wild-type and serine mutants in the signature sequence of adenylosuccinate lyase of Bacillus subtilis and Homo sapiens.

Authors:  Sharmila Sivendran; Roberta F Colman
Journal:  Protein Sci       Date:  2008-05-09       Impact factor: 6.725

6.  Substrate and product complexes of Escherichia coli adenylosuccinate lyase provide new insights into the enzymatic mechanism.

Authors:  May Tsai; Jason Koo; Patrick Yip; Roberta F Colman; Mark L Segall; P Lynne Howell
Journal:  J Mol Biol       Date:  2007-05-04       Impact factor: 5.469

7.  Coenzyme M biosynthesis in bacteria involves phosphate elimination by a functionally distinct member of the aspartase/fumarase superfamily.

Authors:  Sarah E Partovi; Florence Mus; Andrew E Gutknecht; Hunter A Martinez; Brian P Tripet; Bernd Markus Lange; Jennifer L DuBois; John W Peters
Journal:  J Biol Chem       Date:  2018-02-06       Impact factor: 5.157

8.  The structure of phosphate-bound Escherichia coli adenylosuccinate lyase identifies His171 as a catalytic acid.

Authors:  Guennadi Kozlov; Long Nguyen; Jessica Pearsall; Kalle Gehring
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-08-20

9.  Effect of Asp69 and Arg310 on the pK of His68, a key catalytic residue of adenylosuccinate lyase.

Authors:  Sharmila Sivendran; Mark L Segall; Pumtiwitt C Rancy; Roberta F Colman
Journal:  Protein Sci       Date:  2007-06-28       Impact factor: 6.725

10.  Structure of Staphylococcus aureus adenylosuccinate lyase (PurB) and assessment of its potential as a target for structure-based inhibitor discovery.

Authors:  Paul K Fyfe; Alice Dawson; Marie Theres Hutchison; Scott Cameron; William N Hunter
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-07-09
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