Literature DB >> 20857210

Molecular cloning, characterization and expression analysis of adenylosuccinate lyase gene in grass carp (Ctenopharyngodon idella).

Tian Yuan1, Ji-Rui Gu, Wen-Bo Gu, Jiang Wu, Shao-Rong Ge, Heng Xu.   

Abstract

Adenylosuccinate lyase (ADSL) is a bifunctional enzyme acting in de novo purine synthesis and purine nucleotide recycling. In the present study, we have constructed a grass carp (Ctenopharyngodon idella) intestinal cDNA library that has over 2.3 × 10(5) primary clones. An expressed sequence tag (EST) of grass carp adenylosuccinate lyase (gcADSL) gene was screened from this library. Both 5'-RACE and 3'-RACE were carried out in order to obtain the complete cDNA sequence, which contains a 1,446 bp open reading frame encoding 482 amino acids about 54.552 kDa. The deduced amino acid sequence shares high homology with its vertebrate counterparts, which shares 94% similarity with zebrafish, 81% with African clawed frog as well as chicken, 77% with human and 76% with mouse. This gcADSL genomic sequence, consisted of 13 exons and 12 introns, is 8,557 bp in size. Real-time quantitative PCR analysis revealed that the highest expression level of gcADSL was detected in muscle and the lowest in gill. In western blotting analysis, His(6)-tagged gcADSL protein expressed in Escherichia coli could be recognized not only by an anti-His(6)-tag monoclonal antibody but also by an anti-human ADSL polyclonal antibody, indicating immunological crossreactivity occurs between grass carp and human ADSL protein. 1,082 bp 5'-flanking region sequence was cloned and analyzed.

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Year:  2010        PMID: 20857210     DOI: 10.1007/s11033-010-0331-8

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  25 in total

1.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

2.  Escherichia coli purB gene: cloning, nucleotide sequence, and regulation by purR.

Authors:  B He; J M Smith; H Zalkin
Journal:  J Bacteriol       Date:  1992-01       Impact factor: 3.490

3.  In vitro splicing of mRNA precursors: 5' cleavage site can be predicted from the interaction between the 5' splice region and the 5' terminus of U1 snRNA.

Authors:  S Weber; M Aebi
Journal:  Nucleic Acids Res       Date:  1988-01-25       Impact factor: 16.971

4.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

5.  Cloning and characterization of a 12-gene cluster from Bacillus subtilis encoding nine enzymes for de novo purine nucleotide synthesis.

Authors:  D J Ebbole; H Zalkin
Journal:  J Biol Chem       Date:  1987-06-15       Impact factor: 5.157

6.  The crystal structure of adenylosuccinate lyase from Pyrobaculum aerophilum reveals an intracellular protein with three disulfide bonds.

Authors:  E A Toth; C Worby; J E Dixon; E R Goedken; S Marqusee; T O Yeates
Journal:  J Mol Biol       Date:  2000-08-11       Impact factor: 5.469

7.  Human adenylosuccinate lyase (ADSL), cloning and characterization of full-length cDNA and its isoform, gene structure and molecular basis for ADSL deficiency in six patients.

Authors:  S Kmoch; H Hartmannová; B Stibůrková; J Krijt; M Zikánová; I Sebesta
Journal:  Hum Mol Genet       Date:  2000-06-12       Impact factor: 6.150

8.  Purification of adenylosuccinate lyase from rat skeletal muscle by a novel affinity column. Stabilization of the enzyme, and effects of anions and fluoro analogues of the substrate.

Authors:  P J Casey; J M Lowenstein
Journal:  Biochem J       Date:  1987-09-01       Impact factor: 3.857

9.  A mutation in adenylosuccinate lyase associated with mental retardation and autistic features.

Authors:  R L Stone; J Aimi; B A Barshop; J Jaeken; G Van den Berghe; H Zalkin; J E Dixon
Journal:  Nat Genet       Date:  1992-04       Impact factor: 38.330

10.  Molecular characterization and expression pattern of AFPIV during embryogenesis in gibel carp(Carassiu auratus gibelio).

Authors:  Jing-Xia Liu; Yan-Hua Zhai; Jian-Fang Gui
Journal:  Mol Biol Rep       Date:  2008-11-16       Impact factor: 2.316

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  1 in total

1.  Cell death-inducing DFFA-like effector c (CIDEC/Fsp27) gene: molecular cloning, sequence characterization, tissue distribution and polymorphisms in Chinese cattles.

Authors:  Jing Wang; Xiukai Cao; Hong Pan; Liushuai Hua; Mingjuan Yang; Chuzhao Lei; Xianyong Lan; Hong Chen
Journal:  Mol Biol Rep       Date:  2013-09-25       Impact factor: 2.316

  1 in total

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