Literature DB >> 9869642

Lon-mediated proteolysis of the Escherichia coli UmuD mutagenesis protein: in vitro degradation and identification of residues required for proteolysis.

M Gonzalez1, E G Frank, A S Levine, R Woodgate.   

Abstract

Most SOS mutagenesis in Escherichia coli is dependent on the UmuD and UmuC proteins. Perhaps as a consequence, the activity of these proteins is exquisitely regulated. The intracellular level of UmuD and UmuC is normally quite low but increases dramatically in lon- strains, suggesting that both proteins are substrates of the Lon protease. We report here that the highly purified UmuD protein is specifically degraded in vitro by Lon in an ATP-dependent manner. To identify the regions of UmuD necessary for Lon-mediated proteolysis, we performed 'alanine-stretch' mutagenesis on umuD and followed the stability of the mutant protein in vivo. Such an approach allowed us to localize the site(s) within UmuD responsible for Lon-mediated proteolysis. The primary signal is located between residues 15 and 18 (FPLF), with an auxiliary site between residues 26 and 29 (FPSP), of the amino terminus of UmuD. Transfer of the amino terminus of UmuD (residues 1-40) to an otherwise stable protein imparts Lon-mediated proteolysis, thereby indicating that the amino terminus of UmuD is sufficient for Lon recognition and the ensuing degradation of the protein.

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Year:  1998        PMID: 9869642      PMCID: PMC317269          DOI: 10.1101/gad.12.24.3889

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  49 in total

1.  Dominant negative umuD mutations decreasing RecA-mediated cleavage suggest roles for intact UmuD in modulation of SOS mutagenesis.

Authors:  J R Battista; T Ohta; T Nohmi; W Sun; G C Walker
Journal:  Proc Natl Acad Sci U S A       Date:  1990-09       Impact factor: 11.205

2.  UmuC mutagenesis protein of Escherichia coli: purification and interaction with UmuD and UmuD'.

Authors:  R Woodgate; M Rajagopalan; C Lu; H Echols
Journal:  Proc Natl Acad Sci U S A       Date:  1989-10       Impact factor: 11.205

3.  Capsule synthesis in Escherichia coli K-12 is regulated by proteolysis.

Authors:  A S Torres-Cabassa; S Gottesman
Journal:  J Bacteriol       Date:  1987-03       Impact factor: 3.490

4.  The ATP-dependent Clp protease of Escherichia coli. Sequence of clpA and identification of a Clp-specific substrate.

Authors:  S Gottesman; W P Clark; M R Maurizi
Journal:  J Biol Chem       Date:  1990-05-15       Impact factor: 5.157

5.  Carboxy-terminal determinants of intracellular protein degradation.

Authors:  D A Parsell; K R Silber; R T Sauer
Journal:  Genes Dev       Date:  1990-02       Impact factor: 11.361

6.  A pSC101-derived plasmid which shows no sequence homology to other commonly used cloning vectors.

Authors:  G Churchward; D Belin; Y Nagamine
Journal:  Gene       Date:  1984-11       Impact factor: 3.688

7.  Regulation of UmuD cleavage: role of the amino-terminal tail.

Authors:  J P McDonald; E E Maury; A S Levine; R Woodgate
Journal:  J Mol Biol       Date:  1998-10-02       Impact factor: 5.469

8.  An inducible DNA replication-cell division coupling mechanism in E. coli.

Authors:  O Huisman; R D'Ari
Journal:  Nature       Date:  1981-04-30       Impact factor: 49.962

9.  Bleomycin resistance conferred by a drug-binding protein.

Authors:  A Gatignol; H Durand; G Tiraby
Journal:  FEBS Lett       Date:  1988-03-28       Impact factor: 4.124

10.  Protein degradation in Escherichia coli: the lon gene controls the stability of sulA protein.

Authors:  S Mizusawa; S Gottesman
Journal:  Proc Natl Acad Sci U S A       Date:  1983-01       Impact factor: 11.205

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  67 in total

1.  A mutant HemA protein with positive charge close to the N terminus is stabilized against heme-regulated proteolysis in Salmonella typhimurium.

Authors:  L Wang; S Wilson; T Elliott
Journal:  J Bacteriol       Date:  1999-10       Impact factor: 3.490

2.  A model for a umuDC-dependent prokaryotic DNA damage checkpoint.

Authors:  T Opperman; S Murli; B T Smith; G C Walker
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-03       Impact factor: 11.205

3.  Here's the hook: similar substrate binding sites in the chaperone domains of Clp and Lon.

Authors:  S Wickner; M R Maurizi
Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-20       Impact factor: 11.205

4.  Intrinsic polymerase activities of UmuD'(2)C and MucA'(2)B are responsible for their different mutagenic properties during bypass of a T-T cis-syn cyclobutane dimer.

Authors:  P I O'Grady; A Borden; D Vandewiele; A Ozgenc; R Woodgate; C W Lawrence
Journal:  J Bacteriol       Date:  2000-04       Impact factor: 3.490

Review 5.  Managing DNA polymerases: coordinating DNA replication, DNA repair, and DNA recombination.

Authors:  M D Sutton; G C Walker
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

6.  Converting a DNA damage checkpoint effector (UmuD2C) into a lesion bypass polymerase (UmuD'2C).

Authors:  A E Ferentz; G C Walker; G Wagner
Journal:  EMBO J       Date:  2001-08-01       Impact factor: 11.598

7.  Lon and Clp family proteases and chaperones share homologous substrate-recognition domains.

Authors:  C K Smith; T A Baker; R T Sauer
Journal:  Proc Natl Acad Sci U S A       Date:  1999-06-08       Impact factor: 11.205

8.  Distinct peptide signals in the UmuD and UmuD' subunits of UmuD/D' mediate tethering and substrate processing by the ClpXP protease.

Authors:  Saskia B Neher; Robert T Sauer; Tania A Baker
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-31       Impact factor: 11.205

9.  Genomic comparisons of Salmonella enterica serovar Dublin, Agona, and Typhimurium strains recently isolated from milk filters and bovine samples from Ireland, using a Salmonella microarray.

Authors:  F J Reen; E F Boyd; S Porwollik; B P Murphy; D Gilroy; S Fanning; M McClelland
Journal:  Appl Environ Microbiol       Date:  2005-03       Impact factor: 4.792

10.  A trapping approach reveals novel substrates and physiological functions of the essential protease FtsH in Escherichia coli.

Authors:  Kai Westphal; Sina Langklotz; Nikolas Thomanek; Franz Narberhaus
Journal:  J Biol Chem       Date:  2012-10-22       Impact factor: 5.157

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