Literature DB >> 9847083

Quality assessment of whole genome mapping data in the refined familial spastic paraplegia interval on chromosome 14q.

C Paternotte1, D Rudnicki, C Fizames, C S Davoine, D Mavel, A Dürr, D Samson, C Marquette, D Muselet, N Vega-Czarny, N Drouot, T Voit, B Fontaine, G Gyapay, G Auburger, J Weissenbach, J Hazan.   

Abstract

Autosomal dominant familial spastic paraplegia (AD-FSP) is a genetically heterogeneous neurodegenerative disorder characterized by progressive spasticity of the lower limbs. Three loci on chromosome 14q (SPG3), 2p (SPG4), and 15q (SPG6) were shown to be responsible for AD-FSP. Analysis of recombination events in three SPG3-linked families allowed us to narrow the critical interval from 9 to 5 cM. An approximately 5-Mb YAC contig comprising 32 clones and 90 STSs was built from D14S301 to D14S991, encompassing this region of 14q21. Fifty-six ESTs assigned previously to this region with radiation hybrid (RH) panels Genebridge 4 and G3 were precisely localized on the YAC contig. The 90 STSs positioned on the contig were tested on the TNG RH panel to compare our YAC-based map with an RH map at a high level of resolution. Comparison between our map and the whole genome mapping data on this interval of chromosome 14q is discussed.

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Year:  1998        PMID: 9847083      PMCID: PMC310792          DOI: 10.1101/gr.8.11.1216

Source DB:  PubMed          Journal:  Genome Res        ISSN: 1088-9051            Impact factor:   9.043


  34 in total

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4.  Selected locus and multiple panel models for radiation hybrid mapping.

Authors:  K L Lunetta; M Boehnke; K Lange; D R Cox
Journal:  Am J Hum Genet       Date:  1996-09       Impact factor: 11.025

5.  Existence of two gamma subunits of the G proteins in brain.

Authors:  J D Robishaw; V K Kalman; C R Moomaw; C A Slaughter
Journal:  J Biol Chem       Date:  1989-09-25       Impact factor: 5.157

6.  Molecular cloning and expression of biologically active human glia maturation factor-beta.

Authors:  R Kaplan; A Zaheer; M Jaye; R Lim
Journal:  J Neurochem       Date:  1991-08       Impact factor: 5.372

7.  Human Sos1: a guanine nucleotide exchange factor for Ras that binds to GRB2.

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Journal:  Science       Date:  1993-05-28       Impact factor: 47.728

8.  Multiple mRNA forms of human GTP cyclohydrolase I.

Authors:  A Togari; H Ichinose; S Matsumoto; K Fujita; T Nagatsu
Journal:  Biochem Biophys Res Commun       Date:  1992-08-31       Impact factor: 3.575

9.  Multilocus linkage analysis in humans: detection of linkage and estimation of recombination.

Authors:  G M Lathrop; J M Lalouel; C Julier; J Ott
Journal:  Am J Hum Genet       Date:  1985-05       Impact factor: 11.025

10.  Hereditary "pure" spastic paraplegia: a clinical and genetic study of 22 families.

Authors:  A E Harding
Journal:  J Neurol Neurosurg Psychiatry       Date:  1981-10       Impact factor: 10.154

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  6 in total

1.  A new locus for autosomal dominant "pure" hereditary spastic paraplegia mapping to chromosome 12q13, and evidence for further genetic heterogeneity.

Authors:  E Reid; A M Dearlove; M Rhodes; D C Rubinsztein
Journal:  Am J Hum Genet       Date:  1999-09       Impact factor: 11.025

2.  A locus for autosomal dominant "pure" hereditary spastic paraplegia maps to chromosome 19q13.

Authors:  E Reid; A M Dearlove; O Osborn; M T Rogers; D C Rubinsztein
Journal:  Am J Hum Genet       Date:  2000-02       Impact factor: 11.025

3.  Early onset autosomal dominant spastic paraplegia caused by novel mutations in SPG3A.

Authors:  Annette Abel; Nuria Fonknechten; Anne Hofer; Alexandra Dürr; Corinne Cruaud; Thomas Voit; Jean Weissenbach; Alexis Brice; Sven Klimpe; Georg Auburger; Jamilé Hazan
Journal:  Neurogenetics       Date:  2004-10-28       Impact factor: 2.660

Review 4.  Current status of human chromosome 14.

Authors:  D Kamnasaran; D W Cox
Journal:  J Med Genet       Date:  2002-02       Impact factor: 6.318

Review 5.  Hereditary spastic paraplegia: clinico-pathologic features and emerging molecular mechanisms.

Authors:  John K Fink
Journal:  Acta Neuropathol       Date:  2013-07-30       Impact factor: 17.088

Review 6.  Hereditary spastic paraplegia.

Authors:  John K Fink
Journal:  Curr Neurol Neurosci Rep       Date:  2006-01       Impact factor: 5.081

  6 in total

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