Literature DB >> 9811658

The yiaE gene, located at 80.1 minutes on the Escherichia coli chromosome, encodes a 2-ketoaldonate reductase.

D Y Yum1, B Y Lee, D H Hahm, J G Pan.   

Abstract

An open reading frame located in the bisC-cspA intergenic region, or at 80.1 min on the Escherichia coli chromosome, encodes a hypothetical 2-hydroxyacid dehydrogenase, which was identified as a result of the E. coli Genome Sequencing Project. We report here that the product of the gene (yiaE) is a 2-ketoaldonate reductase (2KR). The gene was cloned and expressed with a C-terminal His tag in E. coli, and the protein was purified by metal-chelate affinity chromatography. The determination of the NH2-terminal amino acid sequence of the protein defined the translational start site of this gene. The enzyme was found to be a 2KR catalyzing the reduction of 2, 5-diketo-D-gluconate to 5-keto-D-gluconate, 2-keto-D-gluconate (2KDG) to D-gluconate, 2-keto-L-gulonate to L-idonate. The reductase was optimally active at pH 7.5, with NADPH as a preferred electron donor. The deduced amino acid sequence showed 69.4% identity with that of 2KR from Erwinia herbicola. Disruption of this gene on the chromosome resulted in the loss of 2KR activity in E. coli. E. coli W3110 was found to grow on 2KDG, whereas the mutant deficient in 2KR activity was unable to grow on 2KDG as the carbon source, suggesting that 2KR is responsible for the catabolism of 2KDG in E. coli and the diminishment of produced 2KDG from D-gluconate in the cultivation of E. coli harboring a cloned gluconate dehydrogenase gene.

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Year:  1998        PMID: 9811658      PMCID: PMC107674     

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  18 in total

1.  The complete genome sequence of Escherichia coli K-12.

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Journal:  Science       Date:  1997-09-05       Impact factor: 47.728

2.  Site-directed insertion and deletion mutagenesis with cloned fragments in Escherichia coli.

Authors:  S C Winans; S J Elledge; J H Krueger; G C Walker
Journal:  J Bacteriol       Date:  1985-03       Impact factor: 3.490

3.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

4.  Cloning and expression of a gene cluster encoding three subunits of membrane-bound gluconate dehydrogenase from Erwinia cypripedii ATCC 29267 in Escherichia coli.

Authors:  D Y Yum; Y P Lee; J G Pan
Journal:  J Bacteriol       Date:  1997-11       Impact factor: 3.490

5.  Purification and characterization of the 2-ketoaldonate reductase from Brevibacterium ketosoreductum ATCC21914.

Authors:  D Y Yum; S S Bae; J G Pan
Journal:  Biosci Biotechnol Biochem       Date:  1998-01       Impact factor: 2.043

6.  Biochemical characterization and sequence analysis of the gluconate:NADP 5-oxidoreductase gene from Gluconobacter oxydans.

Authors:  R Klasen; S Bringer-Meyer; H Sahm
Journal:  J Bacteriol       Date:  1995-05       Impact factor: 3.490

7.  Identification of a major soluble protein in mitochondria from nonphotosynthetic tissues as NAD-dependent formate dehydrogenase.

Authors:  C Colas des Francs-Small; F Ambard-Bretteville; I D Small; R Rémy
Journal:  Plant Physiol       Date:  1993-08       Impact factor: 8.340

8.  Purification and characterization of 2,5-diketo-D-gluconate reductase from Corynebacterium sp.

Authors:  J V Miller; D A Estell; R A Lazarus
Journal:  J Biol Chem       Date:  1987-07-05       Impact factor: 5.157

9.  [Utilization and fermentation of 2-ketogluconate by "Enterobacteriaceae" (author's transl)].

Authors:  J Buissière; G Brault; L Le Minor
Journal:  Ann Microbiol (Paris)       Date:  1981 Mar-Apr

10.  Production of 2-Keto-L-Gulonate, an Intermediate in L-Ascorbate Synthesis, by a Genetically Modified Erwinia herbicola.

Authors:  S Anderson; C B Marks; R Lazarus; J Miller; K Stafford; J Seymour; D Light; W Rastetter; D Estell
Journal:  Science       Date:  1985-10-11       Impact factor: 47.728

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  11 in total

1.  DNA from uncultured organisms as a source of 2,5-diketo-D-gluconic acid reductases.

Authors:  W H Eschenfeldt; L Stols; H Rosenbaum; Z S Khambatta; E Quaite-Randall; S Wu; D C Kilgore; J D Trent; M I Donnelly
Journal:  Appl Environ Microbiol       Date:  2001-09       Impact factor: 4.792

2.  Clustered Genes Encoding 2-Keto-l-Gulonate Reductase and l-Idonate 5-Dehydrogenase in the Novel Fungal d-Glucuronic Acid Pathway.

Authors:  Joosu Kuivanen; Mikko Arvas; Peter Richard
Journal:  Front Microbiol       Date:  2017-02-14       Impact factor: 5.640

3.  Biochemical characterization of the 2-ketoacid reductases encoded by ycdW and yiaE genes in Escherichia coli.

Authors:  M F Nuñez; M T Pellicer; J Badia; J Aguilar; L Baldoma
Journal:  Biochem J       Date:  2001-03-15       Impact factor: 3.857

4.  Genetic and biochemical characterization of the pathway in Pantoea citrea leading to pink disease of pineapple.

Authors:  C J Pujol; C I Kado
Journal:  J Bacteriol       Date:  2000-04       Impact factor: 3.490

5.  Identification of the yqhE and yafB genes encoding two 2, 5-diketo-D-gluconate reductases in Escherichia coli.

Authors:  D Y Yum; B Y Lee; J G Pan
Journal:  Appl Environ Microbiol       Date:  1999-08       Impact factor: 4.792

6.  A temperature-regulated Campylobacter jejuni gluconate dehydrogenase is involved in respiration-dependent energy conservation and chicken colonization.

Authors:  Mohanasundari Pajaniappan; Johanna E Hall; Shaun A Cawthraw; Diane G Newell; Erin C Gaynor; Joshua A Fields; Kimberly M Rathbun; Willie A Agee; Christopher M Burns; Stephen J Hall; David J Kelly; Stuart A Thompson
Journal:  Mol Microbiol       Date:  2008-02-19       Impact factor: 3.501

7.  Classification, substrate specificity and structural features of D-2-hydroxyacid dehydrogenases: 2HADH knowledgebase.

Authors:  Dorota Matelska; Ivan G Shabalin; Jagoda Jabłońska; Marcin J Domagalski; Jan Kutner; Krzysztof Ginalski; Wladek Minor
Journal:  BMC Evol Biol       Date:  2018-12-22       Impact factor: 3.260

8.  An aldo-keto reductase with 2-keto-l-gulonate reductase activity functions in l-tartaric acid biosynthesis from vitamin C in Vitis vinifera.

Authors:  Yong Jia; Crista A Burbidge; Crystal Sweetman; Emi Schutz; Kathy Soole; Colin Jenkins; Robert D Hancock; John B Bruning; Christopher M Ford
Journal:  J Biol Chem       Date:  2019-09-04       Impact factor: 5.157

9.  High-Throughput Screening of a 2-Keto-L-Gulonic Acid-Producing Gluconobacter oxydans Strain Based on Related Dehydrogenases.

Authors:  Yue Chen; Li Liu; Xiaoyu Shan; Guocheng Du; Jingwen Zhou; Jian Chen
Journal:  Front Bioeng Biotechnol       Date:  2019-12-13

10.  A novel pathway for fungal D-glucuronate catabolism contains an L-idonate forming 2-keto-L-gulonate reductase.

Authors:  Joosu Kuivanen; Maura H Sugai-Guérios; Mikko Arvas; Peter Richard
Journal:  Sci Rep       Date:  2016-05-18       Impact factor: 4.379

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