Literature DB >> 9808619

GAGA mediates the enhancer blocking activity of the eve promoter in the Drosophila embryo.

S Ohtsuki1, M Levine.   

Abstract

Insulator DNAs and promoter competition regulate enhancer-promoter interactions within complex genetic loci. A transgenic embryo assay was used to obtain evidence that the Drosophila eve promoter possesses an insulator activity that can be uncoupled from the core elements that mediate competition. The eve promoter contains an optimal TATA element and a GAGA sequence. The analysis of various chimeric promoters provides evidence that TATA is essential for promoter competition, whereas GAGA mediates enhancer blocking. The Trithorax-like (Trl) protein interacts with GAGA, and mutations in trl attenuate eve promoter insulator activity. We suggest that Trl-GAGA increases the stability of enhancer-promoter interactions by creating an open chromatin configuration at the core promoter.

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Year:  1998        PMID: 9808619      PMCID: PMC317233          DOI: 10.1101/gad.12.21.3325

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  37 in total

1.  A group of scs elements function as domain boundaries in an enhancer-blocking assay.

Authors:  R Kellum; P Schedl
Journal:  Mol Cell Biol       Date:  1992-05       Impact factor: 4.272

2.  A position-effect assay for boundaries of higher order chromosomal domains.

Authors:  R Kellum; P Schedl
Journal:  Cell       Date:  1991-03-08       Impact factor: 41.582

3.  Direct homeodomain-DNA interaction in the autoregulation of the fushi tarazu gene.

Authors:  A F Schier; W J Gehring
Journal:  Nature       Date:  1992-04-30       Impact factor: 49.962

4.  Individual stage selector element mutations lead to reciprocal changes in beta- vs. epsilon-globin gene transcription: genetic confirmation of promoter competition during globin gene switching.

Authors:  K P Foley; J D Engel
Journal:  Genes Dev       Date:  1992-05       Impact factor: 11.361

5.  The solution structure of a specific GAGA factor-DNA complex reveals a modular binding mode.

Authors:  J G Omichinski; P V Pedone; G Felsenfeld; A M Gronenborn; G M Clore
Journal:  Nat Struct Biol       Date:  1997-02

Review 6.  Transcription initiation from TATA-less promoters within eukaryotic protein-coding genes.

Authors:  S T Smale
Journal:  Biochim Biophys Acta       Date:  1997-03-20

7.  The Fab-7 element of the bithorax complex attenuates enhancer-promoter interactions in the Drosophila embryo.

Authors:  J Zhou; S Barolo; P Szymanski; M Levine
Journal:  Genes Dev       Date:  1996-12-15       Impact factor: 11.361

8.  Fab-7 functions as a chromatin domain boundary to ensure proper segment specification by the Drosophila bithorax complex.

Authors:  K Hagstrom; M Muller; P Schedl
Journal:  Genes Dev       Date:  1996-12-15       Impact factor: 11.361

9.  Selectivity, sharing and competitive interactions in the regulation of Hoxb genes.

Authors:  J Sharpe; S Nonchev; A Gould; J Whiting; R Krumlauf
Journal:  EMBO J       Date:  1998-03-16       Impact factor: 11.598

10.  Sequence of a Drosophila segmentation gene: protein structure homology with DNA-binding proteins.

Authors:  A Laughon; M P Scott
Journal:  Nature       Date:  1984 Jul 5-11       Impact factor: 49.962

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  71 in total

1.  Cohabitation of insulators and silencing elements in yeast subtelomeric regions.

Authors:  G Fourel; E Revardel; C E Koering; E Gilson
Journal:  EMBO J       Date:  1999-05-04       Impact factor: 11.598

2.  Differences in insulator properties revealed by enhancer blocking assays on episomes.

Authors:  T J Parnell; P K Geyer
Journal:  EMBO J       Date:  2000-11-01       Impact factor: 11.598

3.  Deletion of an insulator element by the mutation facet-strawberry in Drosophila melanogaster.

Authors:  J Vazquez; P Schedl
Journal:  Genetics       Date:  2000-07       Impact factor: 4.562

4.  GAGA can mediate enhancer function in trans by linking two separate DNA molecules.

Authors:  Tokameh Mahmoudi; Katerina R Katsani; C Peter Verrijzer
Journal:  EMBO J       Date:  2002-04-02       Impact factor: 11.598

5.  Coupling of enhancer and insulator properties identified in two retrotransposons modulates their mutagenic impact on nearby genes.

Authors:  Caroline Conte; Bernard Dastugue; Chantal Vaury
Journal:  Mol Cell Biol       Date:  2002-03       Impact factor: 4.272

6.  A variably occupied CTCF binding site in the ultrabithorax gene in the Drosophila bithorax complex.

Authors:  Jose Paolo Magbanua; Estelle Runneburger; Steven Russell; Robert White
Journal:  Mol Cell Biol       Date:  2014-11-03       Impact factor: 4.272

7.  Functional studies of the BTB domain in the Drosophila GAGA and Mod(mdg4) proteins.

Authors:  D Read; M J Butte; A F Dernburg; M Frasch; T B Kornberg
Journal:  Nucleic Acids Res       Date:  2000-10-15       Impact factor: 16.971

8.  Promoter competition as a mechanism of transcriptional interference mediated by retrotransposons.

Authors:  Caroline Conte; Bernard Dastugue; Chantal Vaury
Journal:  EMBO J       Date:  2002-07-15       Impact factor: 11.598

9.  A novel boundary element may facilitate independent gene regulation in the Antennapedia complex of Drosophila.

Authors:  Vladimir E Belozerov; Parimal Majumder; Ping Shen; Haini N Cai
Journal:  EMBO J       Date:  2003-06-16       Impact factor: 11.598

10.  The enhancer-blocking activity of the Fab-7 boundary from the Drosophila bithorax complex requires GAGA-factor-binding sites.

Authors:  Susan Schweinsberg; Kirsten Hagstrom; Daryl Gohl; Paul Schedl; Ram P Kumar; Rakesh Mishra; Francois Karch
Journal:  Genetics       Date:  2004-11       Impact factor: 4.562

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