Literature DB >> 9789021

The conducting form of gramicidin A is a right-handed double-stranded double helix.

B M Burkhart1, N Li, D A Langs, W A Pangborn, W L Duax.   

Abstract

The linear pentadecapeptide antibiotic, gramicidin D, is a naturally occurring product of Bacillus brevis known to form ion channels in synthetic and natural membranes. The x-ray crystal structures of the right-handed double-stranded double-helical dimers (DSDH) reported here agree with 15N-NMR and CD data on the functional gramicidin D channel in lipid bilayers. These structures demonstrate single-file ion transfer through the channels. The results also indicate that previous crystal structure reports of a left-handed double-stranded double-helical dimer in complex with Cs+ and K+ salts may be in error and that our evidence points to the DSDH as the major conformer responsible for ion transport in membranes.

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Year:  1998        PMID: 9789021      PMCID: PMC23667          DOI: 10.1073/pnas.95.22.12950

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  25 in total

1.  Heterodimer formation and crystal nucleation of gramicidin D.

Authors:  B M Burkhart; R M Gassman; D A Langs; W A Pangborn; W L Duax
Journal:  Biophys J       Date:  1998-11       Impact factor: 4.033

2.  Deuterium nuclear magnetic resonance investigation of the exchangeable sites on gramicidin A and gramicidin S in multilamellar vesicles of dipalmitoylphosphatidylcholine.

Authors:  K P Datema; K P Pauls; M Bloom
Journal:  Biochemistry       Date:  1986-07-01       Impact factor: 3.162

3.  The gramicidin pore: crystal structure of a cesium complex.

Authors:  B A Wallace; K Ravikumar
Journal:  Science       Date:  1988-07-08       Impact factor: 47.728

4.  Three-dimensional structure at 0.86 A of the uncomplexed form of the transmembrane ion channel peptide gramicidin A.

Authors:  D A Langs
Journal:  Science       Date:  1988-07-08       Impact factor: 47.728

5.  Transmembrane channels based on tartaric acid-gramicidin A hybrids.

Authors:  C J Stankovic; S H Heinemann; J M Delfino; F J Sigworth; S L Schreiber
Journal:  Science       Date:  1989-05-19       Impact factor: 47.728

6.  Solid-state 15N NMR of oriented lipid bilayer bound gramicidin A'.

Authors:  L K Nicholson; F Moll; T E Mixon; P V LoGrasso; J C Lay; T A Cross
Journal:  Biochemistry       Date:  1987-10-20       Impact factor: 3.162

7.  The conformation of gramicidin A.

Authors:  W R Veatch; E T Fossel; E R Blout
Journal:  Biochemistry       Date:  1974-12-17       Impact factor: 3.162

8.  1H-NMR study of gramicidin A transmembrane ion channel. Head-to-head right-handed, single-stranded helices.

Authors:  A S Arseniev; I L Barsukov; V F Bystrov; A L Lomize
Journal:  FEBS Lett       Date:  1985-07-08       Impact factor: 4.124

9.  Development of K+-Na+ discrimination in experimental bimolecular lipid membranes by macrocyclic antibiotics.

Authors:  P Mueller; D O Rudin
Journal:  Biochem Biophys Res Commun       Date:  1967-02-21       Impact factor: 3.575

10.  The membrane as an environment of minimal interconversion. A circular dichroism study on the solvent dependence of the conformational behavior of gramicidin in diacylphosphatidylcholine model membranes.

Authors:  J A Killian; K U Prasad; D Hains; D W Urry
Journal:  Biochemistry       Date:  1988-06-28       Impact factor: 3.162

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  26 in total

1.  Covalently linked gramicidin channels: effects of linker hydrophobicity and alkaline metals on different stereoisomers.

Authors:  K M Armstrong; E P Quigley; P Quigley; D S Crumrine; S Cukierman
Journal:  Biophys J       Date:  2001-04       Impact factor: 4.033

2.  Validation of the single-stranded channel conformation of gramicidin A by solid-state NMR.

Authors:  F Kovacs; J Quine; T A Cross
Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-06       Impact factor: 11.205

3.  The pH-dependent induction of lipid membrane ionic permeability by N-terminally lysine-substituted analogs of gramicidin A.

Authors:  Tatyana I Rokitskaya; Alexandra I Sorochkina; Sergey I Kovalchuk; Natalya S Egorova; Elena A Kotova; Sergey V Sychev; Yuri N Antonenko
Journal:  Eur Biophys J       Date:  2011-11-01       Impact factor: 1.733

4.  Diversity in antistaphylococcal mechanisms among membrane-targeting antimicrobial peptides.

Authors:  S P Koo; A S Bayer; M R Yeaman
Journal:  Infect Immun       Date:  2001-08       Impact factor: 3.441

5.  Use of reverse micelles in membrane protein structural biology.

Authors:  Wade D Van Horn; Mark E Ogilvie; Peter F Flynn
Journal:  J Biomol NMR       Date:  2008-02-23       Impact factor: 2.835

6.  Modeling the membrane environment for membrane proteins.

Authors:  Frances Separovic; J Antoinette Killian; Myriam Cotten; David D Busath; Timothy A Cross
Journal:  Biophys J       Date:  2011-04-20       Impact factor: 4.033

7.  Membrane Protein Crystallization in Lipidic Mesophases. Hosting lipid affects on the crystallization and structure of a transmembrane peptide.

Authors:  Nicole Höfer; David Aragão; Joseph A Lyons; Martin Caffrey
Journal:  Cryst Growth Des       Date:  2011-02-16       Impact factor: 4.076

8.  Spin-labeled gramicidin a: channel formation and dissociation.

Authors:  Boris G Dzikovski; Petr P Borbat; Jack H Freed
Journal:  Biophys J       Date:  2004-08-23       Impact factor: 4.033

9.  Failures in clinical treatment of Staphylococcus aureus Infection with daptomycin are associated with alterations in surface charge, membrane phospholipid asymmetry, and drug binding.

Authors:  Tiffanny Jones; Michael R Yeaman; George Sakoulas; Soo-Jin Yang; Richard A Proctor; Hans-Georg Sahl; Jacques Schrenzel; Yan Q Xiong; Arnold S Bayer
Journal:  Antimicrob Agents Chemother       Date:  2007-10-22       Impact factor: 5.191

10.  Structural restraints and heterogeneous orientation of the gramicidin A channel closed state in lipid bilayers.

Authors:  Y Mo; T A Cross; W Nerdal
Journal:  Biophys J       Date:  2004-05       Impact factor: 4.033

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