Literature DB >> 2458757

The membrane as an environment of minimal interconversion. A circular dichroism study on the solvent dependence of the conformational behavior of gramicidin in diacylphosphatidylcholine model membranes.

J A Killian1, K U Prasad, D Hains, D W Urry.   

Abstract

The conformation of gramicidin in diacylphosphatidylcholine model membranes was investigated as a function of the solvent in which peptide and lipid are initially codissolved. By use of circular dichroism it is demonstrated that, upon removal of the solvent and hydration of the mixed gramicidin/lipid film, it is the conformational behavior of the peptide in the organic solvent that determines its final conformation in dimyristoylphosphatidylcholine model membranes. As a consequence, parameters that influence the conformation of the peptide in the solvent also play an essential role, such as the gramicidin concentration and the rate of interconversion between different conformations. Of the various solvents investigated, only with trifluoroethanol is it possible directly to incorporate gramicidin entirely in the beta 6.3-helical (channel) configuration. It is also shown that the conformation of gramicidin in the membrane varies with the peptide/lipid ratio, most likely as a result of intermolecular gramicidin-gramicidin interactions at higher peptide/lipid ratios, and that heat incubation leads to a conformational change in the direction of the beta 6.3-helical conformation. Using lipids with an acyl chain length varying from 12 carbon atoms in dilauroylphosphatidylcholine to 22 carbon atoms in dierucoylphosphatidylcholine, it was possible to investigate the acyl chain length dependence of the gramicidin conformation in model membranes prepared from these lipids with the use of different solvent systems. It is demonstrated for each solvent system that the distribution between different conformations is relatively independent of the acyl chain length but that the rate at which the conformation converts toward the beta 6.3-helical configuration upon heating of the samples is affected by the length of the acyl chain.(ABSTRACT TRUNCATED AT 250 WORDS)

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Year:  1988        PMID: 2458757     DOI: 10.1021/bi00413a040

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  39 in total

1.  Solvent effects on the conformation of the transmembrane peptide gramicidin A: insights from electrospray ionization mass spectrometry.

Authors:  M Bouchard; D R Benjamin; P Tito; C V Robinson; C M Dobson
Journal:  Biophys J       Date:  2000-02       Impact factor: 4.033

2.  On the supramolecular organization of gramicidin channels. The elementary conducting unit is a dimer.

Authors:  A S Cifu; R E Koeppe; O S Andersen
Journal:  Biophys J       Date:  1992-01       Impact factor: 4.033

3.  A semi-empirical approach for the simulation of circular dichroism spectra of gramicidin A in a model membrane.

Authors:  M C Bañó; L Braco; C Abad
Journal:  Biophys J       Date:  1992-07       Impact factor: 4.033

4.  The pH-dependent induction of lipid membrane ionic permeability by N-terminally lysine-substituted analogs of gramicidin A.

Authors:  Tatyana I Rokitskaya; Alexandra I Sorochkina; Sergey I Kovalchuk; Natalya S Egorova; Elena A Kotova; Sergey V Sychev; Yuri N Antonenko
Journal:  Eur Biophys J       Date:  2011-11-01       Impact factor: 1.733

5.  Gramicidin single-channel properties show no solvent-history dependence.

Authors:  D B Sawyer; R E Koeppe; O S Andersen
Journal:  Biophys J       Date:  1990-03       Impact factor: 4.033

6.  Optimizing and characterizing alignment of oriented lipid bilayers containing gramicidin D.

Authors:  F Moll; T A Cross
Journal:  Biophys J       Date:  1990-02       Impact factor: 4.033

7.  Monitoring membrane protein conformational heterogeneity by fluorescence lifetime distribution analysis using the maximum entropy method.

Authors:  Sourav Haldar; Mamata Kombrabail; G Krishnamoorthy; Amitabha Chattopadhyay
Journal:  J Fluoresc       Date:  2009-10-09       Impact factor: 2.217

8.  Orientational constraints as three-dimensional structural constraints from chemical shift anisotropy: the polypeptide backbone of gramicidin A in a lipid bilayer.

Authors:  W Mai; W Hu; C Wang; T A Cross
Journal:  Protein Sci       Date:  1993-04       Impact factor: 6.725

9.  High-resolution structure and dynamic implications for a double-helical gramicidin A conformer.

Authors:  S M Pascal; T A Cross
Journal:  J Biomol NMR       Date:  1993-09       Impact factor: 2.835

10.  Effect of structural transition of the host assembly on dynamics of an ion channel peptide: a fluorescence approach.

Authors:  Satinder S Rawat; Devaki A Kelkar; Amitabha Chattopadhyay
Journal:  Biophys J       Date:  2005-08-12       Impact factor: 4.033

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