Literature DB >> 2408920

1H-NMR study of gramicidin A transmembrane ion channel. Head-to-head right-handed, single-stranded helices.

A S Arseniev, I L Barsukov, V F Bystrov, A L Lomize.   

Abstract

The structure of [Val1]gramicidin A incorporated into sodium dodecyl-d25 sulphate micelles has been studied by two-dimensional proton NMR spectroscopy. Analysis of nuclear Overhauser effects, spin-spin couplings and solvent accessibility of NH groups show that the conformation of the Na+ complex of gramicidin A in detergent micelles, which in many ways mimic the phospholipid bilayer of biomembranes, is an N-terminal to N-terminal (head-to-head) dimer (Formula: see text) formed by two right-handed, single-stranded beta 6.3 helices with 6.3 residues per turn, differing from Urry's structure by handedness of the helices.

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Year:  1985        PMID: 2408920     DOI: 10.1016/0014-5793(85)80702-x

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  105 in total

1.  Covalently linked gramicidin channels: effects of linker hydrophobicity and alkaline metals on different stereoisomers.

Authors:  K M Armstrong; E P Quigley; P Quigley; D S Crumrine; S Cukierman
Journal:  Biophys J       Date:  2001-04       Impact factor: 4.033

2.  Solvent effects on the conformation of the transmembrane peptide gramicidin A: insights from electrospray ionization mass spectrometry.

Authors:  M Bouchard; D R Benjamin; P Tito; C V Robinson; C M Dobson
Journal:  Biophys J       Date:  2000-02       Impact factor: 4.033

3.  Proton mobilities in water and in different stereoisomers of covalently linked gramicidin A channels.

Authors:  S Cukierman
Journal:  Biophys J       Date:  2000-04       Impact factor: 4.033

4.  Supramolecular structures of peptide assemblies in membranes by neutron off-plane scattering: method of analysis.

Authors:  L Yang; T M Weiss; T A Harroun; W T Heller; H W Huang
Journal:  Biophys J       Date:  1999-11       Impact factor: 4.033

5.  The conduction of protons in different stereoisomers of dioxolane-linked gramicidin A channels.

Authors:  E P Quigley; P Quigley; D S Crumrine; S Cukierman
Journal:  Biophys J       Date:  1999-11       Impact factor: 4.033

6.  Noncontact dipole effects on channel permeation. II. Trp conformations and dipole potentials in gramicidin A.

Authors:  A E Dorigo; D G Anderson; D D Busath
Journal:  Biophys J       Date:  1999-04       Impact factor: 4.033

7.  A combined molecular dynamics and diffusion model of single proton conduction through gramicidin.

Authors:  M F Schumaker; R Pomès; B Roux
Journal:  Biophys J       Date:  2000-12       Impact factor: 4.033

8.  Spatial structure of zervamicin IIB bound to DPC micelles: implications for voltage-gating.

Authors:  Z O Shenkarev; T A Balashova; R G Efremov; Z A Yakimenko; T V Ovchinnikova; J Raap; A S Arseniev
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

9.  Large-scale molecular dynamics simulations of general anesthetic effects on the ion channel in the fully hydrated membrane: the implication of molecular mechanisms of general anesthesia.

Authors:  Pei Tang; Yan Xu
Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-18       Impact factor: 11.205

10.  Electrospray ionization-mass spectrometry and tandem mass spectrometry reveal self-association and metal-ion binding of hydrophobic peptides: a study of the gramicidin dimer.

Authors:  Raghu K Chitta; Michael L Gross
Journal:  Biophys J       Date:  2004-01       Impact factor: 4.033

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