Literature DB >> 9774697

Schizosaccharomyces pombe retrotransposon Tf2 mobilizes primarily through homologous cDNA recombination.

E F Hoff1, H L Levin, J D Boeke.   

Abstract

The Tf2 retrotransposon, found in the fission yeast Schizosaccharomyces pombe, is nearly identical to its sister element, Tf1, in its reverse transcriptase-RNase H and integrase domains but is very divergent in the gag domain, the protease, the 5' untranslated region, and the U3 domain of the long terminal repeats. It has now been demonstrated that a neo-marked copy of Tf2 overexpressed from a heterologous promoter can mobilize into the S. pombe genome and produce true transposition events. However, the Tf2-neo mobilization frequency is 10- to 20-fold lower than that of Tf1-neo, and 70% of the Tf2-neo events are homologous recombination events generated independently of a functional Tf2 integrase. Thus, the Tf2 element is primarily dependent on homologous recombination with preexisting copies of Tf2 for its propagation. Finally, production of Tf2-neo proteins and cDNA was also analyzed; surprisingly, Tf2 was found to produce its reverse transcriptase as a single species in which it is fused to protease, unlike all other retroviruses and retrotransposons.

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Year:  1998        PMID: 9774697      PMCID: PMC109267          DOI: 10.1128/MCB.18.11.6839

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  57 in total

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Journal:  Annu Rev Genet       Date:  1990       Impact factor: 16.830

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Journal:  J Biol Chem       Date:  1990-07-05       Impact factor: 5.157

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Authors:  S D Youngren; J D Boeke; N J Sanders; D J Garfinkel
Journal:  Mol Cell Biol       Date:  1988-04       Impact factor: 4.272

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Journal:  Proc Natl Acad Sci U S A       Date:  1989-08       Impact factor: 11.205

5.  Upstream and downstream transcriptional control signals in the yeast retrotransposon, TY.

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Journal:  Nucleic Acids Res       Date:  1988-06-24       Impact factor: 16.971

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Authors:  T A Kunkel
Journal:  Proc Natl Acad Sci U S A       Date:  1985-01       Impact factor: 11.205

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Authors:  J D Boeke; C A Styles; G R Fink
Journal:  Mol Cell Biol       Date:  1986-11       Impact factor: 4.272

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Authors:  C Grimm; J Kohli
Journal:  Mol Gen Genet       Date:  1988-12

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Authors:  P Mertins; D Gallwitz
Journal:  Nucleic Acids Res       Date:  1987-09-25       Impact factor: 16.971

10.  The Saccharomyces cerevisiae genome contains functional and nonfunctional copies of transposon Ty1.

Authors:  J D Boeke; D Eichinger; D Castrillon; G R Fink
Journal:  Mol Cell Biol       Date:  1988-04       Impact factor: 4.272

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  20 in total

1.  A long terminal repeat-containing retrotransposon of Schizosaccharomyces pombe expresses a Gag-like protein that assembles into virus-like particles which mediate reverse transcription.

Authors:  Laure Teysset; Van-Dinh Dang; Min Kyung Kim; Henry L Levin
Journal:  J Virol       Date:  2003-05       Impact factor: 5.103

2.  Single-Nucleotide-Specific Targeting of the Tf1 Retrotransposon Promoted by the DNA-Binding Protein Sap1 of Schizosaccharomyces pombe.

Authors:  Anthony Hickey; Caroline Esnault; Anasuya Majumdar; Atreyi Ghatak Chatterjee; James R Iben; Philip G McQueen; Andrew X Yang; Takeshi Mizuguchi; Shiv I S Grewal; Henry L Levin
Journal:  Genetics       Date:  2015-09-09       Impact factor: 4.562

3.  Specific recognition and cleavage of the plus-strand primer by reverse transcriptase.

Authors:  Angela Atwood-Moore; Kenechi Ejebe; Henry L Levin
Journal:  J Virol       Date:  2005-12       Impact factor: 5.103

4.  Ty1 copy number dynamics in Saccharomyces.

Authors:  David J Garfinkel; Katherine M Nyswaner; Karen M Stefanisko; Caroline Chang; Sharon P Moore
Journal:  Genetics       Date:  2005-01-31       Impact factor: 4.562

5.  Chromodomains direct integration of retrotransposons to heterochromatin.

Authors:  Xiang Gao; Yi Hou; Hirotaka Ebina; Henry L Levin; Daniel F Voytas
Journal:  Genome Res       Date:  2008-02-06       Impact factor: 9.043

Review 6.  Small RNAs, big impact: small RNA pathways in transposon control and their effect on the host stress response.

Authors:  Bayly S Wheeler
Journal:  Chromosome Res       Date:  2013-12       Impact factor: 5.239

7.  Multiple Transcriptional and Post-transcriptional Pathways Collaborate to Control Sense and Antisense RNAs of Tf2 Retroelements in Fission Yeast.

Authors:  Pierre-Luc Mallet; Marc Larochelle; François Bachand
Journal:  Genetics       Date:  2016-12-22       Impact factor: 4.562

8.  An active retrotransposon in Candida albicans.

Authors:  N J Holton; T J Goodwin; M I Butler; R T Poulter
Journal:  Nucleic Acids Res       Date:  2001-10-01       Impact factor: 16.971

9.  A long terminal repeat retrotransposon of fission yeast has strong preferences for specific sites of insertion.

Authors:  Teresa L Singleton; Henry L Levin
Journal:  Eukaryot Cell       Date:  2002-02

10.  Retrotransposons and their recognition of pol II promoters: a comprehensive survey of the transposable elements from the complete genome sequence of Schizosaccharomyces pombe.

Authors:  Nathan J Bowen; I King Jordan; Jonathan A Epstein; Valerie Wood; Henry L Levin
Journal:  Genome Res       Date:  2003-09       Impact factor: 9.043

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