Literature DB >> 9774613

Pretreatment with restriction enzyme or bovine serum albumin for effective PCR amplification of Epstein-Barr virus DNA in DNA extracted from paraffin-embedded gastric carcinoma tissue.

Y Satoh1, N Takasaka, Y Hoshikawa, M Osaki, S Ohfuji, H Ito, N Kaibara, T Kurata, T Sairenji.   

Abstract

An association between Epstein-Barr virus (EBV) and gastric carcinoma has been studied through the EBV genome present in the carcinoma cells. Recently, we found that EBV DNA in paraffin-embedded gastric carcinoma tissue was detected effectively by PCR after pretreatment of the extracted DNA with a restriction enzyme, BamHI or EcoRI. Here, we show that the PCR amplification was also enhanced by pretreatment of the DNA with other restriction enzymes or with bovine serum albumin and several other proteins. Treatment with these proteins may remove a PCR inhibitor(s) in the DNA samples extracted from the paraffin blocks.

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Year:  1998        PMID: 9774613      PMCID: PMC105349     

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  25 in total

1.  A simple and rapid technique to process formalin-fixed, paraffin-embedded tissues for the detection of viruses by the polymerase chain reaction.

Authors:  P Kiene; K Milde-Langosch; M Runkel; K Schulz; T Löning
Journal:  Virchows Arch A Pathol Anat Histopathol       Date:  1992

2.  Removal of inhibitor(s) of the polymerase chain reaction from formalin fixed, paraffin wax embedded tissues.

Authors:  S F An; K A Fleming
Journal:  J Clin Pathol       Date:  1991-11       Impact factor: 3.411

3.  Detection of hepatitis B virus DNA in formalin-fixed, paraffin-embedded liver tissue by the polymerase chain reaction.

Authors:  P Lampertico; J S Malter; M Colombo; M A Gerber
Journal:  Am J Pathol       Date:  1990-08       Impact factor: 4.307

4.  Geographical variation in prevalence of hepatitis B virus DNA in HBsAg negative patients.

Authors:  Y M Lo; E S Lo; W Z Mehal; M Sampietro; G Fiorelli; G Ronchi; C H Tse; K A Fleming
Journal:  J Clin Pathol       Date:  1993-04       Impact factor: 3.411

5.  Epstein-Barr virus in gastric carcinoma.

Authors:  M Tokunaga; C E Land; Y Uemura; T Tokudome; S Tanaka; E Sato
Journal:  Am J Pathol       Date:  1993-11       Impact factor: 4.307

6.  Gastric carcinoma: monoclonal epithelial malignant cells expressing Epstein-Barr virus latent infection protein.

Authors:  S Imai; S Koizumi; M Sugiura; M Tokunaga; Y Uemura; N Yamamoto; S Tanaka; E Sato; T Osato
Journal:  Proc Natl Acad Sci U S A       Date:  1994-09-13       Impact factor: 11.205

7.  Association of Epstein-Barr virus with undifferentiated gastric carcinomas with intense lymphoid infiltration. Lymphoepithelioma-like carcinoma.

Authors:  D Shibata; M Tokunaga; Y Uemura; E Sato; S Tanaka; L M Weiss
Journal:  Am J Pathol       Date:  1991-09       Impact factor: 4.307

8.  Poorly differentiated adenocarcinoma with lymphoid stroma (lymphoepithelioma-like carcinomas) of the stomach. Report of three cases with Epstein-Barr virus genome demonstrated by the polymerase chain reaction.

Authors:  K W Min; S Holmquist; S C Peiper; T J O'Leary
Journal:  Am J Clin Pathol       Date:  1991-08       Impact factor: 2.493

9.  Epstein-Barr virus-associated gastric carcinoma and Epstein-Barr virus infection of the stomach.

Authors:  M Fukayama; Y Hayashi; Y Iwasaki; J Chong; T Ooba; T Takizawa; M Koike; S Mizutani; M Miyaki; K Hirai
Journal:  Lab Invest       Date:  1994-07       Impact factor: 5.662

10.  Rapid techniques for DNA extraction from routinely processed archival tissue for use in PCR.

Authors:  R Sepp; I Szabó; H Uda; H Sakamoto
Journal:  J Clin Pathol       Date:  1994-04       Impact factor: 3.411

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  5 in total

1.  Effects of amplification facilitators on diagnostic PCR in the presence of blood, feces, and meat.

Authors:  W Abu Al-Soud; P Rådström
Journal:  J Clin Microbiol       Date:  2000-12       Impact factor: 5.948

2.  Rapid differentiation of Borrelia garinii from Borrelia afzelii and Borrelia burgdorferi sensu stricto by LightCycler fluorescence melting curve analysis of a PCR product of the recA gene.

Authors:  J Pietilä; Q He; J Oksi; M K Viljanen
Journal:  J Clin Microbiol       Date:  2000-07       Impact factor: 5.948

3.  Detection and location of Helicobacter pylori in human gastric carcinomas.

Authors:  Yun-Lian Tang; Run-Liang Gan; Bi-Hua Dong; Ri-Chen Jiang; Rong-Jun Tang
Journal:  World J Gastroenterol       Date:  2005-03-07       Impact factor: 5.742

4.  Epstein-Barr virus DNA is detected in peripheral blood mononuclear cells of EBV-seronegative infants with infectious mononucleosis-like symptoms.

Authors:  Kazufumi Ikuta; Kyoko Saiga; Masanori Deguchi; Takeshi Sairenji
Journal:  Virus Genes       Date:  2003       Impact factor: 2.332

5.  Epstein-Barr virus as a marker of biological aggressiveness in breast cancer.

Authors:  C Mazouni; F Fina; S Romain; L Ouafik; P Bonnier; J-M Brandone; P-M Martin
Journal:  Br J Cancer       Date:  2010-12-21       Impact factor: 7.640

  5 in total

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