Literature DB >> 9774602

Evaluation of strategies for molecular fingerprinting for use in the routine work of a Mycobacterium reference unit.

S M Wilson1, S Goss, F Drobniewski.   

Abstract

We have investigated the role of two rapid PCR-based typing methods, IS6110-based PCR and spacer-oligonucleotide typing, within a national tuberculosis reference service. The validity of clusters with IS6110 restriction fragment length polymorphism fingerprints with less than 6 bands was also investigated in the context of referred isolates.

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Year:  1998        PMID： 9774602      PMCID： PMC105338     

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  12 in total

1.  Double-repetitive-element PCR method for subtyping Mycobacterium tuberculosis clinical isolates.

Authors:  C R Friedman; M Y Stoeckle; W D Johnson; L W Riley
Journal:  J Clin Microbiol       Date:  1995-05       Impact factor: 5.948

2.  Strain identification of Mycobacterium tuberculosis by DNA fingerprinting: recommendations for a standardized methodology.

Authors:  J D van Embden; M D Cave; J T Crawford; J W Dale; K D Eisenach; B Gicquel; P Hermans; C Martin; R McAdam; T M Shinnick
Journal:  J Clin Microbiol       Date:  1993-02       Impact factor: 5.948

3.  IS6110 based amplityping assay and RFLP fingerprinting of clinical isolates of Mycobacterium tuberculosis.

Authors:  K Y Yuen; C M Chan; K S Chan; W C Yam; P L Ho; P Y Chau
Journal:  J Clin Pathol       Date:  1995-10       Impact factor: 3.411

4.  Heminested inverse PCR for IS6110 fingerprinting of Mycobacterium tuberculosis strains.

Authors:  S Patel; S Wall; N A Saunders
Journal:  J Clin Microbiol       Date:  1996-07       Impact factor: 5.948

5.  Simultaneous detection and strain differentiation of Mycobacterium tuberculosis for diagnosis and epidemiology.

Authors:  J Kamerbeek; L Schouls; A Kolk; M van Agterveld; D van Soolingen; S Kuijper; A Bunschoten; H Molhuizen; R Shaw; M Goyal; J van Embden
Journal:  J Clin Microbiol       Date:  1997-04       Impact factor: 5.948

6.  Evaluation of method for secondary DNA typing of Mycobacterium tuberculosis with pTBN12 in epidemiologic study of tuberculosis.

Authors:  Z Yang; F Chaves; P F Barnes; W J Burman; J Koehler; K D Eisenach; J H Bates; M D Cave
Journal:  J Clin Microbiol       Date:  1996-12       Impact factor: 5.948

7.  Rapid, amplification-based fingerprinting of Mycobacterium tuberculosis.

Authors:  B B Plikaytis; J T Crawford; C L Woodley; W R Butler; K D Eisenach; M D Cave; T M Shinnick
Journal:  J Gen Microbiol       Date:  1993-07

8.  Mixed-linker polymerase chain reaction: a new method for rapid fingerprinting of isolates of the Mycobacterium tuberculosis complex.

Authors:  W H Haas; W R Butler; C L Woodley; J T Crawford
Journal:  J Clin Microbiol       Date:  1993-05       Impact factor: 5.948

9.  Rapid, simple method for typing isolates of Mycobacterium tuberculosis by using the polymerase chain reaction.

Authors:  B C Ross; B Dwyer
Journal:  J Clin Microbiol       Date:  1993-02       Impact factor: 5.948

10.  Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence.

Authors:  S T Cole; R Brosch; J Parkhill; T Garnier; C Churcher; D Harris; S V Gordon; K Eiglmeier; S Gas; C E Barry; F Tekaia; K Badcock; D Basham; D Brown; T Chillingworth; R Connor; R Davies; K Devlin; T Feltwell; S Gentles; N Hamlin; S Holroyd; T Hornsby; K Jagels; A Krogh; J McLean; S Moule; L Murphy; K Oliver; J Osborne; M A Quail; M A Rajandream; J Rogers; S Rutter; K Seeger; J Skelton; R Squares; S Squares; J E Sulston; K Taylor; S Whitehead; B G Barrell
Journal:  Nature       Date:  1998-06-11       Impact factor: 49.962
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  13 in total

1.  Different strategies for molecular differentiation of Mycobacterium bovis strains isolated in Sardinia, Italy.

Authors:  L A Sechi; G Leori; S A Lollai; I Duprè; P Molicotti; G Fadda; S Zanetti
Journal:  Appl Environ Microbiol       Date:  1999-04       Impact factor: 4.792

2.  Characterization of Mycobacterium tuberculosis isolates from patients in Houston, Texas, by spoligotyping.

Authors:  H Soini; X Pan; A Amin; E A Graviss; A Siddiqui; J M Musser
Journal:  J Clin Microbiol       Date:  2000-02       Impact factor: 5.948

3.  Mycobacterial interspersed repetitive unit typing of Mycobacterium tuberculosis compared to IS6110-based restriction fragment length polymorphism analysis for investigation of apparently clustered cases of tuberculosis.

Authors:  Peter M Hawkey; E Grace Smith; Jason T Evans; Philip Monk; Gerry Bryan; Huda H Mohamed; Madhu Bardhan; R Nicholas Pugh
Journal:  J Clin Microbiol       Date:  2003-08       Impact factor: 5.948

4.  Evaluation of a rapid PCR-based epidemiological typing method for routine studies of Mycobacterium tuberculosis.

Authors:  Malcolm D Yates; Francis A Drobniewski; Stuart M Wilson
Journal:  J Clin Microbiol       Date:  2002-02       Impact factor: 5.948

5.  Characterization of Finnish Mycobacterium tuberculosis isolates by spoligotyping.

Authors:  Kirsi Puustinen; Merja Marjamäki; Nalin Rastogi; Christophe Sola; Ingrid Filliol; Petri Ruutu; Pekka Holmström; Matti K Viljanen; Hanna Soini
Journal:  J Clin Microbiol       Date:  2003-04       Impact factor: 5.948

Review 6.  Control and prevention of tuberculosis in the United Kingdom: code of practice 2000. Joint Tuberculosis Committee of the British Thoracic Society.

Authors: 
Journal:  Thorax       Date:  2000-11       Impact factor: 9.139

7.  Spoligotyping profile change caused by deletion of a direct variable repeat in a Mycobacterium tuberculosis isogenic laboratory strain.

Authors:  Alicia Aranaz; Beatriz Romero; Natalia Montero; Julio Alvarez; Javier Bezos; Lucía de Juan; Ana Mateos; Lucas Domínguez
Journal:  J Clin Microbiol       Date:  2004-11       Impact factor: 5.948

8.  Distribution of a specific 500-base-pair fragment in mycobacterium bovis isolates from Sardinian cattle.

Authors:  L A Sechi; I Duprè; G Leori; G Fadda; S Zanetti
Journal:  J Clin Microbiol       Date:  2000-10       Impact factor: 5.948

9.  Snapshot of moving and expanding clones of Mycobacterium tuberculosis and their global distribution assessed by spoligotyping in an international study.

Authors:  Ingrid Filliol; Jeffrey R Driscoll; Dick van Soolingen; Barry N Kreiswirth; Kristin Kremer; Georges Valétudie; Duc Anh Dang; Rachael Barlow; Dilip Banerjee; Pablo J Bifani; Karine Brudey; Angel Cataldi; Robert C Cooksey; Debby V Cousins; Jeremy W Dale; Odir A Dellagostin; Francis Drobniewski; Guido Engelmann; Séverine Ferdinand; Deborah Gascoyne-Binzi; Max Gordon; M Cristina Gutierrez; Walter H Haas; Herre Heersma; Eric Kassa-Kelembho; Minh Ly Ho; Athanasios Makristathis; Caterina Mammina; Gerald Martin; Peter Moström; Igor Mokrousov; Valérie Narbonne; Olga Narvskaya; Antonino Nastasi; Sara Ngo Niobe-Eyangoh; Jean W Pape; Voahangy Rasolofo-Razanamparany; Malin Ridell; M Lucia Rossetti; Fritz Stauffer; Philip N Suffys; Howard Takiff; Jeanne Texier-Maugein; Véronique Vincent; Jacobus H de Waard; Christophe Sola; Nalin Rastogi
Journal:  J Clin Microbiol       Date:  2003-05       Impact factor: 5.948

10.  High rates of clustering of strains causing tuberculosis in Harare, Zimbabwe: a molecular epidemiological study.

Authors:  Philippa J Easterbrook; Andrea Gibson; Shahed Murad; Dianie Lamprecht; Natalie Ives; Alex Ferguson; Odette Lowe; Peter Mason; Angelika Ndudzo; Alfred Taziwa; Robert Makombe; Lovemore Mbengeranwa; Christophe Sola; Nalin Rastogi; Nalim Rostogi; Francis Drobniewski
Journal:  J Clin Microbiol       Date:  2004-10       Impact factor: 5.948
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