Literature DB >> 9723623

Structure of a cephalosporin synthase.

K Valegård1, A C van Scheltinga, M D Lloyd, T Hara, S Ramaswamy, A Perrakis, A Thompson, H J Lee, J E Baldwin, C J Schofield, J Hajdu, I Andersson.   

Abstract

Penicillins and cephalosporins are among the most widely used therapeutic agents. These antibiotics are produced from fermentation-derived materials as their chemical synthesis is not commercially viable. Unconventional steps in their biosynthesis are catalysed by Fe(II)-dependent oxidases/oxygenases; isopenicillin N synthase (IPNS) creates in one step the bicyclic nucleus of penicillins, and deacetoxycephalosporin C synthase (DAOCS) catalyses the expansion of the penicillin nucleus into the nucleus of cephalosporins. Both enzymes use dioxygen-derived ferryl intermediates in catalysis but, in contrast to IPNS, the ferryl form of DAOCS is produced by the oxidative splitting of a co-substrate, 2-oxoglutarate (alpha-ketoglutarate). This route of controlled ferryl formation and reaction is common to many mononuclear ferrous enzymes, which participate in a broader range of reactions than their well-characterized counterparts, the haem enzymes. Here we report the first crystal structure of a 2-oxoacid-dependent oxygenase. High-resolution structures for apo-DAOCS, the enzyme complexed with Fe(II), and with Fe(II) and 2-oxoglutarate, were obtained from merohedrally twinned crystals. Using a model based on these structures, we propose a mechanism for ferryl formation.

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Year:  1998        PMID: 9723623     DOI: 10.1038/29575

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  72 in total

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Authors:  Mark R Chance; Anne R Bresnick; Stephen K Burley; Jian-Sheng Jiang; Christopher D Lima; Andrej Sali; Steven C Almo; Jeffrey B Bonanno; John A Buglino; Simon Boulton; Hua Chen; Narayanan Eswar; Guoshun He; Raymond Huang; Valentin Ilyin; Linda McMahan; Ursula Pieper; Soumya Ray; Marc Vidal; Li Kai Wang
Journal:  Protein Sci       Date:  2002-04       Impact factor: 6.725

2.  Engineering Streptomyces clavuligerus deacetoxycephalosporin C synthase for optimal ring expansion activity toward penicillin G.

Authors:  Chia-Li Wei; Yunn-Bor Yang; Wen-Ching Wang; Wen-Chi Liu; Jyh-Shing Hsu; Ying-Chieh Tsai
Journal:  Appl Environ Microbiol       Date:  2003-04       Impact factor: 4.792

3.  Conformational switch triggered by alpha-ketoglutarate in a halogenase of curacin A biosynthesis.

Authors:  Dheeraj Khare; Bo Wang; Liangcai Gu; Jamie Razelun; David H Sherman; William H Gerwick; Kristina Håkansson; Janet L Smith
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-26       Impact factor: 11.205

4.  Self-hydroxylation of taurine/alpha-ketoglutarate dioxygenase: evidence for more than one oxygen activation mechanism.

Authors:  Kevin D Koehntop; Sudha Marimanikkuppam; Matthew J Ryle; Robert P Hausinger; Lawrence Que
Journal:  J Biol Inorg Chem       Date:  2005-12-01       Impact factor: 3.358

5.  Interconversion of two oxidized forms of taurine/alpha-ketoglutarate dioxygenase, a non-heme iron hydroxylase: evidence for bicarbonate binding.

Authors:  Matthew J Ryle; Kevin D Koehntop; Aimin Liu; Lawrence Que; Robert P Hausinger
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-17       Impact factor: 11.205

6.  The crystal structures of Zea mays and Arabidopsis 4-hydroxyphenylpyruvate dioxygenase.

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7.  Sudestada1, a Drosophila ribosomal prolyl-hydroxylase required for mRNA translation, cell homeostasis, and organ growth.

Authors:  Maximiliano J Katz; Julieta M Acevedo; Christoph Loenarz; Diego Galagovsky; Phebee Liu-Yi; Marcelo Pérez-Pepe; Armin Thalhammer; Rok Sekirnik; Wei Ge; Mariana Melani; María G Thomas; Sergio Simonetta; Graciela L Boccaccio; Christopher J Schofield; Matthew E Cockman; Peter J Ratcliffe; Pablo Wappner
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-18       Impact factor: 11.205

8.  Expression of novel rice gibberellin 2-oxidase gene is under homeostatic regulation by biologically active gibberellins.

Authors:  Miho Sakai; Tomoaki Sakamoto; Tamio Saito; Makoto Matsuoka; Hiroshi Tanaka; Masatomo Kobayashi
Journal:  J Plant Res       Date:  2003-02-18       Impact factor: 2.629

9.  Evaluation of a concerted vs. sequential oxygen activation mechanism in α-ketoglutarate-dependent nonheme ferrous enzymes.

Authors:  Serra Goudarzi; Shyam R Iyer; Jeffrey T Babicz; James J Yan; Günther H J Peters; Hans E M Christensen; Britt Hedman; Keith O Hodgson; Edward I Solomon
Journal:  Proc Natl Acad Sci U S A       Date:  2020-02-24       Impact factor: 11.205

10.  Isolation and expression profiles of gibberellin metabolism genes in developing male and female cones of Pinus tabuliformis.

Authors:  Shihui Niu; Lu Yuan; Yuncheng Zhang; Xiaoyang Chen; Wei Li
Journal:  Funct Integr Genomics       Date:  2014-07-31       Impact factor: 3.410

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