Literature DB >> 20660778

Conformational switch triggered by alpha-ketoglutarate in a halogenase of curacin A biosynthesis.

Dheeraj Khare1, Bo Wang, Liangcai Gu, Jamie Razelun, David H Sherman, William H Gerwick, Kristina Håkansson, Janet L Smith.   

Abstract

The CurA halogenase (Hal) catalyzes a cryptic chlorination leading to cyclopropane ring formation in the synthesis of the natural product curacin A. Hal belongs to a family of enzymes that use Fe(2+), O(2) and alpha-ketoglutarate (alphaKG) to perform a variety of halogenation reactions in natural product biosynthesis. Crystal structures of the enzyme in five ligand states reveal strikingly different open and closed conformations dependent on alphaKG binding. The open form represents ligand-free enzyme, preventing substrate from entering the active site until both alphaKG and chloride are bound, while the closed form represents the holoenzyme with alphaKG and chloride coordinated to iron. Candidate amino acid residues involved in substrate recognition were identified by site-directed mutagenesis. These new structures provide direct evidence of a conformational switch driven by alphaKG leading to chlorination of an early pathway intermediate.

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Year:  2010        PMID: 20660778      PMCID: PMC2922534          DOI: 10.1073/pnas.1006738107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  22 in total

1.  Geometric and electronic structure/function correlations in non-heme iron enzymes.

Authors:  E I Solomon; T C Brunold; M I Davis; J N Kemsley; S K Lee; N Lehnert; F Neese; A J Skulan; Y S Yang; J Zhou
Journal:  Chem Rev       Date:  2000-01-12       Impact factor: 60.622

2.  Enzymatic generation of the antimetabolite gamma,gamma-dichloroaminobutyrate by NRPS and mononuclear iron halogenase action in a streptomycete.

Authors:  Masashi Ueki; Danica P Galonić; Frédéric H Vaillancourt; Sylvie Garneau-Tsodikova; Ellen Yeh; David A Vosburg; Frank C Schroeder; Hiroyuki Osada; Christopher T Walsh
Journal:  Chem Biol       Date:  2006-11

Review 3.  What's new in enzymatic halogenations.

Authors:  Danica Galonić Fujimori; Christopher T Walsh
Journal:  Curr Opin Chem Biol       Date:  2007-09-18       Impact factor: 8.822

4.  Biosynthetic pathway and gene cluster analysis of curacin A, an antitubulin natural product from the tropical marine cyanobacterium Lyngbya majuscula.

Authors:  Zunxue Chang; Namthip Sitachitta; James V Rossi; Mary Ann Roberts; Patricia M Flatt; Junyong Jia; David H Sherman; William H Gerwick
Journal:  J Nat Prod       Date:  2004-08       Impact factor: 4.050

5.  Substrate positioning controls the partition between halogenation and hydroxylation in the aliphatic halogenase, SyrB2.

Authors:  Megan L Matthews; Christopher S Neumann; Linde A Miles; Tyler L Grove; Squire J Booker; Carsten Krebs; Christopher T Walsh; J Martin Bollinger
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-06       Impact factor: 11.205

6.  Substrate-triggered formation and remarkable stability of the C-H bond-cleaving chloroferryl intermediate in the aliphatic halogenase, SyrB2.

Authors:  Megan L Matthews; Courtney M Krest; Eric W Barr; Frédéric H Vaillancourt; Christopher T Walsh; Michael T Green; Carsten Krebs; J Martin Bollinger
Journal:  Biochemistry       Date:  2009-05-26       Impact factor: 3.162

7.  Characterization of the interaction of the marine cyanobacterial natural product curacin A with the colchicine site of tubulin and initial structure-activity studies with analogues.

Authors:  A V Blokhin; H D Yoo; R S Geralds; D G Nagle; W H Gerwick; E Hamel
Journal:  Mol Pharmacol       Date:  1995-09       Impact factor: 4.436

8.  Structure of human phytanoyl-CoA 2-hydroxylase identifies molecular mechanisms of Refsum disease.

Authors:  Michael A McDonough; Kathryn L Kavanagh; Danica Butler; Timothy Searls; Udo Oppermann; Christopher J Schofield
Journal:  J Biol Chem       Date:  2005-09-25       Impact factor: 5.157

Review 9.  Structural studies on 2-oxoglutarate oxygenases and related double-stranded beta-helix fold proteins.

Authors:  Ian J Clifton; Michael A McDonough; Dominic Ehrismann; Nadia J Kershaw; Nicolas Granatino; Christopher J Schofield
Journal:  J Inorg Biochem       Date:  2006-03-02       Impact factor: 4.155

10.  Structural analysis of an open active site conformation of nonheme iron halogenase CytC3.

Authors:  Cintyu Wong; Danica Galonić Fujimori; Christopher T Walsh; Catherine L Drennan
Journal:  J Am Chem Soc       Date:  2009-04-08       Impact factor: 15.419

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  36 in total

Review 1.  The Uncommon Enzymology of Cis-Acyltransferase Assembly Lines.

Authors:  Adrian T Keatinge-Clay
Journal:  Chem Rev       Date:  2017-04-10       Impact factor: 60.622

2.  Structural basis of functional group activation by sulfotransferases in complex metabolic pathways.

Authors:  Jennifer Gehret McCarthy; Eli B Eisman; Sarang Kulkarni; Lena Gerwick; William H Gerwick; Peter Wipf; David H Sherman; Janet L Smith
Journal:  ACS Chem Biol       Date:  2012-09-26       Impact factor: 5.100

Review 3.  Dioxygen activation by nonheme iron enzymes with the 2-His-1-carboxylate facial triad that generate high-valent oxoiron oxidants.

Authors:  Subhasree Kal; Lawrence Que
Journal:  J Biol Inorg Chem       Date:  2017-01-10       Impact factor: 3.358

4.  Combining Mass Spectrometric Metabolic Profiling with Genomic Analysis: A Powerful Approach for Discovering Natural Products from Cyanobacteria.

Authors:  Karin Kleigrewe; Jehad Almaliti; Isaac Yuheng Tian; Robin B Kinnel; Anton Korobeynikov; Emily A Monroe; Brendan M Duggan; Vincenzo Di Marzo; David H Sherman; Pieter C Dorrestein; Lena Gerwick; William H Gerwick
Journal:  J Nat Prod       Date:  2015-07-07       Impact factor: 4.050

5.  Characterization of molecular interactions between ACP and halogenase domains in the Curacin A polyketide synthase.

Authors:  Alena Busche; Daniel Gottstein; Christopher Hein; Nina Ripin; Irina Pader; Peter Tufar; Eli B Eisman; Liangcai Gu; Christopher T Walsh; David H Sherman; Frank Löhr; Peter Güntert; Volker Dötsch
Journal:  ACS Chem Biol       Date:  2011-12-15       Impact factor: 5.100

Review 6.  A sea of biosynthesis: marine natural products meet the molecular age.

Authors:  Amy L Lane; Bradley S Moore
Journal:  Nat Prod Rep       Date:  2010-12-17       Impact factor: 13.423

7.  Ab initio structural modeling of and experimental validation for Chlamydia trachomatis protein CT296 reveal structural similarity to Fe(II) 2-oxoglutarate-dependent enzymes.

Authors:  Kyle E Kemege; John M Hickey; Scott Lovell; Kevin P Battaile; Yang Zhang; P Scott Hefty
Journal:  J Bacteriol       Date:  2011-09-30       Impact factor: 3.490

8.  Vinylogous Dehydration by a Polyketide Dehydratase Domain in Curacin Biosynthesis.

Authors:  William D Fiers; Greg J Dodge; David H Sherman; Janet L Smith; Courtney C Aldrich
Journal:  J Am Chem Soc       Date:  2016-11-30       Impact factor: 15.419

Review 9.  Structural analysis of protein-protein interactions in type I polyketide synthases.

Authors:  Wei Xu; Kangjian Qiao; Yi Tang
Journal:  Crit Rev Biochem Mol Biol       Date:  2012-12-19       Impact factor: 8.250

10.  Crystal structure of the ectoine hydroxylase, a snapshot of the active site.

Authors:  Astrid Höppner; Nils Widderich; Michael Lenders; Erhard Bremer; Sander H J Smits
Journal:  J Biol Chem       Date:  2014-08-29       Impact factor: 5.157

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