Literature DB >> 9692330

Novel miniproteins engineered by the transfer of active sites to small natural scaffolds.

C Vita1, J Vizzavona, E Drakopoulou, S Zinn-Justin, B Gilquin, A Ménez.   

Abstract

Small multidisulfide-containing proteins are attractive structural templates to produce a biologically active conformation that mimics the binding surface of natural large proteins. In particular, the structural motif that is evolutionary conserved in all scorpion toxins has a small size (30-40 amino acid residues), a great structural stability, and high permissiveness for sequence mutation. This motif is composed of a beta-sheet and an alpha-helix bridged in the interior core by three disulfides. We have used this motif successfully to transfer within its beta-sheet new functional sites, including the curaremimetic loop of a snake neurotoxin and the CDR2-like site of human CD4. Accumulated evidence indicated that the two miniproteins produced, the curaremimetic miniprotein and the CD4 mimetic, contain the alpha/beta fold that is characteristic of the scaffold used and bind respectively to the acetylcholine receptor and to the envelope gp120 of HIV-1. Furthermore, the latter was shown to prevent viral infection of lymphocytes. These examples illustrate that, by the transfer of active sites to small and stable natural scaffolds, it is possible to engineer miniproteins reproducing, in part, the function of much larger proteins. Such miniproteins may be of great utility as tools in structure-function studies and as leads in drug design.

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Year:  1998        PMID: 9692330     DOI: 10.1002/(SICI)1097-0282(1998)47:1<93::AID-BIP10>3.0.CO;2-H

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  11 in total

1.  BetaCore, a designed water soluble four-stranded antiparallel beta-sheet protein.

Authors:  Natàlia Carulla; Clare Woodward; George Barany
Journal:  Protein Sci       Date:  2002-06       Impact factor: 6.725

2.  Lead optimization of antifungal peptides with 3D NMR structures analysis.

Authors:  Céline Landon; Florent Barbault; Michèle Legrain; Laure Menin; Marc Guenneugues; Valérie Schott; Françoise Vovelle; Jean-Luc Dimarcq
Journal:  Protein Sci       Date:  2004-03       Impact factor: 6.725

3.  Rational engineering of a miniprotein that reproduces the core of the CD4 site interacting with HIV-1 envelope glycoprotein.

Authors:  C Vita; E Drakopoulou; J Vizzavona; S Rochette; L Martin; A Ménez; C Roumestand; Y S Yang; L Ylisastigui; A Benjouad; J C Gluckman
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-09       Impact factor: 11.205

Review 4.  A new generation of protein display scaffolds for molecular recognition.

Authors:  Ralf J Hosse; Achim Rothe; Barbara E Power
Journal:  Protein Sci       Date:  2006-01       Impact factor: 6.725

5.  Simultaneous determination of disulphide bridge topology and three-dimensional structure using ambiguous intersulphur distance restraints: possibilities and limitations.

Authors:  J Boisbouvier; M Blackledge; A Sollier; D Marion
Journal:  J Biomol NMR       Date:  2000-03       Impact factor: 2.835

6.  Blocking HIV-1 gp120 at the Phe43 cavity: if the extension fits….

Authors:  Barna Dey; Edward A Berger
Journal:  Structure       Date:  2013-06-04       Impact factor: 5.006

7.  Synthesis, antiviral activity and resistance of a novel small molecule HIV-1 entry inhibitor.

Authors:  Francesca Curreli; Kashfia Haque; Lihua Xie; Qian Qiu; Jinfeng Xu; Weizhong Yong; Xiaohe Tong; Asim K Debnath
Journal:  Bioorg Med Chem       Date:  2015-11-10       Impact factor: 3.641

8.  Direct expression and validation of phage-selected peptide variants in mammalian cells.

Authors:  Brian D Quinlan; Matthew R Gardner; Vinita R Joshi; Jessica J Chiang; Michael Farzan
Journal:  J Biol Chem       Date:  2013-05-10       Impact factor: 5.157

9.  Affimer proteins inhibit immune complex binding to FcγRIIIa with high specificity through competitive and allosteric modes of action.

Authors:  James I Robinson; Euan W Baxter; Robin L Owen; Maren Thomsen; Darren C Tomlinson; Mark P Waterhouse; Stephanie J Win; Joanne E Nettleship; Christian Tiede; Richard J Foster; Raymond J Owens; Colin W G Fishwick; Sarah A Harris; Adrian Goldman; Michael J McPherson; Ann W Morgan
Journal:  Proc Natl Acad Sci U S A       Date:  2017-12-15       Impact factor: 11.205

10.  Structure based antibody-like peptidomimetics.

Authors:  Ramachandran Murali; Mark I Greene
Journal:  Pharmaceuticals (Basel)       Date:  2012-02-16
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