Literature DB >> 9641976

Perturbation of nucleosome structure by the erythroid transcription factor GATA-1.

J Boyes1, J Omichinski, D Clark, M Pikaart, G Felsenfeld.   

Abstract

The ability of transcription factors to gain access to their sites in chromatin requires the disruption or displacement of nucleosomes covering the promoter, signalled by the generation of a nuclease hypersensitive site. We characterise here the alterations in nucleosome structure caused by binding of the erythroid factor GATA-1 to a nucleosome carrying GATA-1 sites. DNase I and micrococcal nuclease probes show that GATA-1 binding causes extensive, cooperative breakage of the histone/DNA contacts to generate a complex very similar to that formed by the factor with free DNA. The only region which differs is confined to about 50 bp surrounding the nucleosome dyad axis which appears to be the domain of residual contact between the DNA and histone octamer. Despite considerable breakage of the histone/DNA contacts, the complex is completely stable in solution, and disruption of the nucleosome is entirely reversible: it is regenerated quantitatively upon removal of the transcription factor. Moreover, the histone 2A/2B component of the octamer does not exchange to external competitor. We suggest that formation of this complex may be a step in the generation of a fully hypersensitive site in vivo over regulatory elements containing GATA family binding sites.

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Year:  1998        PMID: 9641976     DOI: 10.1006/jmbi.1998.1783

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  21 in total

1.  Acetylation of a specific promoter nucleosome accompanies activation of the epsilon-globin gene by beta-globin locus control region HS2.

Authors:  C Y Gui; A Dean
Journal:  Mol Cell Biol       Date:  2001-02       Impact factor: 4.272

2.  The GATA factor AreA is essential for chromatin remodelling in a eukaryotic bidirectional promoter.

Authors:  M I Muro-Pastor; R Gonzalez; J Strauss; F Narendja; C Scazzocchio
Journal:  EMBO J       Date:  1999-03-15       Impact factor: 11.598

3.  Coregulator-dependent facilitation of chromatin occupancy by GATA-1.

Authors:  Saumen Pal; Alan B Cantor; Kirby D Johnson; Tyler B Moran; Meghan E Boyer; Stuart H Orkin; Emery H Bresnick
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-08       Impact factor: 11.205

4.  A paradoxical mutant GATA factor.

Authors:  M Isabel Muro-Pastor; Joseph Strauss; Ana Ramón; Claudio Scazzocchio
Journal:  Eukaryot Cell       Date:  2004-04

Review 5.  Two distinct pathways responsible for the loading of CENP-A to centromeres in the fission yeast cell cycle.

Authors:  Kohta Takahashi; Yuko Takayama; Fumie Masuda; Yasuyo Kobayashi; Shigeaki Saitoh
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2005-03-29       Impact factor: 6.237

6.  GATA-1 modulates the chromatin structure and activity of the chicken alpha-globin 3' enhancer.

Authors:  Martín Escamilla-Del-Arenal; Félix Recillas-Targa
Journal:  Mol Cell Biol       Date:  2007-11-05       Impact factor: 4.272

7.  Combination of two regulatory elements in the Tetrahymena thermophila HSP70-1 gene controls heat shock activation.

Authors:  Sabrina Barchetta; Antonietta La Terza; Patrizia Ballarini; Sandra Pucciarelli; Cristina Miceli
Journal:  Eukaryot Cell       Date:  2007-11-30

8.  Crystal structures of multiple GATA zinc fingers bound to DNA reveal new insights into DNA recognition and self-association by GATA.

Authors:  Darren L Bates; Yongheng Chen; Grace Kim; Liang Guo; Lin Chen
Journal:  J Mol Biol       Date:  2008-07-02       Impact factor: 5.469

9.  Regulation of nucleosome landscape and transcription factor targeting at tissue-specific enhancers by BRG1.

Authors:  Gangqing Hu; Dustin E Schones; Kairong Cui; River Ybarra; Daniel Northrup; Qingsong Tang; Luca Gattinoni; Nicholas P Restifo; Suming Huang; Keji Zhao
Journal:  Genome Res       Date:  2011-07-27       Impact factor: 9.043

10.  HMG-D and histone H1 alter the local accessibility of nucleosomal DNA.

Authors:  Anan Ragab; Andrew Travers
Journal:  Nucleic Acids Res       Date:  2003-12-15       Impact factor: 16.971

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