Literature DB >> 9591682

Electron transfer and protein dynamics in the photosynthetic reaction center.

B H McMahon1, J D Müller, C A Wraight, G U Nienhaus.   

Abstract

We have measured the kinetics of electron transfer (ET) from the primary quinone (Q(A)) to the special pair (P) of the reaction center (RC) complex from Rhodobacter sphaeroides as a function of temperature (5-300 K), illumination protocol (cooled in the dark and under illumination from 110, 160, 180, and 280 K), and warming rate (1.3 and 13 mK/s). The nonexponential kinetics are interpreted with a quantum-mechanical ET model (Fermi's golden rule and the spin-boson model), in which heterogeneity of the protein ensemble, relaxations, and fluctuations are cast into a single coordinate that relaxes monotonically and is sensitive to all types of relaxations caused by ET. Our analysis shows that the structural changes that occur in response to ET decrease the free energy gap between donor and acceptor states by 120 meV and decrease the electronic coupling between donor and acceptor states from 2.7 x 10(-4) cm(-1) to 1.8 x 10(-4) cm(-1). At cryogenic temperatures, conformational changes can be slowed or completely arrested, allowing us to monitor relaxations on the annealing time scale (approximately 10(3)-10(4) s) as well as the time scale of ET (approximately 100 ms). The relaxations occur within four broad tiers of conformational substates with average apparent Arrhenius activation enthalpies of 17, 50, 78, and 110 kJ/mol and preexponential factors of 10(13), 10(15), 10(21), and 10(25) s(-1), respectively. The parameterization provides a prediction of the time course of relaxations at all temperatures. At 300 K, relaxations are expected to occur from 1 ps to 1 ms, whereas at lower temperatures, even broader distributions of relaxation times are expected. The weak dependence of the ET rate on both temperature and protein conformation, together with the possibility of modeling heterogeneity and dynamics with a single conformational coordinate, make RC a useful model system for probing the dynamics of conformational changes in proteins.

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Year:  1998        PMID: 9591682      PMCID: PMC1299598          DOI: 10.1016/S0006-3495(98)77964-0

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  48 in total

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3.  Ligand binding to heme proteins: connection between dynamics and function.

Authors:  P J Steinbach; A Ansari; J Berendzen; D Braunstein; K Chu; B R Cowen; D Ehrenstein; H Frauenfelder; J B Johnson; D C Lamb
Journal:  Biochemistry       Date:  1991-04-23       Impact factor: 3.162

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Authors:  H Frauenfelder; S G Sligar; P G Wolynes
Journal:  Science       Date:  1991-12-13       Impact factor: 47.728

5.  Ligand binding to heme proteins. VI. Interconversion of taxonomic substates in carbonmonoxymyoglobin.

Authors:  J B Johnson; D C Lamb; H Frauenfelder; J D Müller; B McMahon; G U Nienhaus; R D Young
Journal:  Biophys J       Date:  1996-09       Impact factor: 4.033

6.  Dispersed polaron simulations of electron transfer in photosynthetic reaction centers.

Authors:  A Warshel; Z T Chu; W W Parson
Journal:  Science       Date:  1989-10-06       Impact factor: 47.728

7.  Looking into the energy landscape of myoglobin.

Authors:  D T Leeson; D A Wiersma
Journal:  Nat Struct Biol       Date:  1995-10

8.  Conformational relaxation of a low-temperature protein as probed by photochemical hole burning. Horseradish peroxidase.

Authors:  J Zollfrank; J Friedrich; J M Vanderkooi; J Fidy
Journal:  Biophys J       Date:  1991-02       Impact factor: 4.033

9.  Crystal structures of CO-, deoxy- and met-myoglobins at various pH values.

Authors:  F Yang; G N Phillips
Journal:  J Mol Biol       Date:  1996-03-08       Impact factor: 5.469

10.  Photolysis-induced structural changes in single crystals of carbonmonoxy myoglobin at 40 K.

Authors:  T Y Teng; V Srajer; K Moffat
Journal:  Nat Struct Biol       Date:  1994-10
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  46 in total

1.  A kinetic assessment of the sequence of electron transfer from F(X) to F(A) and further to F(B) in photosystem I: the value of the equilibrium constant between F(X) and F(A).

Authors:  V P Shinkarev; I R Vassiliev; J H Golbeck
Journal:  Biophys J       Date:  2000-01       Impact factor: 4.033

2.  Photosynthetic electron transfer controlled by protein relaxation: analysis by Langevin stochastic approach.

Authors:  D A Cherepanov; L I Krishtalik; A Y Mulkidjanian
Journal:  Biophys J       Date:  2001-03       Impact factor: 4.033

3.  Electron transfer kinetics in photosynthetic reaction centers embedded in trehalose glasses: trapping of conformational substates at room temperature.

Authors:  Gerardo Palazzo; Antonia Mallardi; Alejandro Hochkoeppler; Lorenzo Cordone; Giovanni Venturoli
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

4.  The effect of ligand dynamics on heme electronic transition band III in myoglobin.

Authors:  Karin Nienhaus; Don C Lamb; Pengchi Deng; G Ulrich Nienhaus
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

5.  Self-regulation phenomena in bacterial reaction centers. I. General theory.

Authors:  A O Goushcha; V N Kharkyanen; G W Scott; A R Holzwarth
Journal:  Biophys J       Date:  2000-09       Impact factor: 4.033

6.  Cumulant analysis of charge recombination kinetics in bacterial reaction centers reconstituted into lipid vesicles.

Authors:  G Palazzo; A Mallardi; M Giustini; D Berti; G Venturoli
Journal:  Biophys J       Date:  2000-09       Impact factor: 4.033

7.  Electron transport dynamics at the quinone acceptor site of bacterial photosynthetic reaction centers as probed using fast temperature changes.

Authors:  Sergei K Chamorovsky; Peter P Knox; Igor V Chizhov; Boris V Zubov
Journal:  Eur Biophys J       Date:  2003-03-18       Impact factor: 1.733

8.  Photodynamics of red fluorescent proteins studied by fluorescence correlation spectroscopy.

Authors:  Andreas Schenk; Sergey Ivanchenko; Carlheinz Röcker; Jörg Wiedenmann; G Ulrich Nienhaus
Journal:  Biophys J       Date:  2004-01       Impact factor: 4.033

9.  Structural, dynamic, and energetic aspects of long-range electron transfer in photosynthetic reaction centers.

Authors:  Jan M Kriegl; G Ulrich Nienhaus
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-22       Impact factor: 11.205

10.  Direct observation of tiers in the energy landscape of a chromoprotein: a single-molecule study.

Authors:  Clemens Hofmann; Thijs J Aartsma; Hartmut Michel; Jürgen Köhler
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-11       Impact factor: 11.205

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