Literature DB >> 9547289

Highly sensitive detection of gene expression of an intronless gene: amplification of mRNA, but not genomic DNA by nucleic acid sequence based amplification (NASBA).

A Heim1, I M Grumbach, S Zeuke, B Top.   

Abstract

NASBA is an isothermal nucleic acid amplification reaction that amplifies mRNA in a dsDNA background. Although similar to the sensitive reverse transcription/polymerase chain reaction (RT-PCR) in mRNA detection, NASBA is not prone to give false positive results caused by genomic dsDNA. Therefore, NASBA is unique for sensitive detection of transcription of intronless genes, which preclude strategies such as intron spanning primer pairs to control false positive results in RT-PCR. Using NASBA, mRNA of the intronless human interferon-beta gene was demonstrated with a sensitivity of 10 copies, whereas 100 ng genomic DNA gave a negative result.

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Year:  1998        PMID: 9547289      PMCID: PMC147515          DOI: 10.1093/nar/26.9.2250

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  12 in total

1.  Cloning of the cDNA for the human beta 1-adrenergic receptor.

Authors:  T Frielle; S Collins; K W Daniel; M G Caron; R J Lefkowitz; B K Kobilka
Journal:  Proc Natl Acad Sci U S A       Date:  1987-11       Impact factor: 11.205

2.  NASBA isothermal enzymatic in vitro nucleic acid amplification optimized for the diagnosis of HIV-1 infection.

Authors:  T Kievits; B van Gemen; D van Strijp; R Schukkink; M Dircks; H Adriaanse; L Malek; R Sooknanan; P Lens
Journal:  J Virol Methods       Date:  1991-12       Impact factor: 2.014

3.  Nucleic acid sequence-based amplification.

Authors:  J Compton
Journal:  Nature       Date:  1991-03-07       Impact factor: 49.962

Review 4.  [Structure of the histamine H1 receptor gene and transcriptional up-regulation of the H1 receptor].

Authors:  H Fukui
Journal:  Nihon Rinsho       Date:  1996-02

5.  Delineation of the intronless nature of the genes for the human and hamster beta 2-adrenergic receptor and their putative promoter regions.

Authors:  B K Kobilka; T Frielle; H G Dohlman; M A Bolanowski; R A Dixon; P Keller; M G Caron; R J Lefkowitz
Journal:  J Biol Chem       Date:  1987-05-25       Impact factor: 5.157

6.  Structure and chromosomal localization of the functional intronless human JUN protooncogene.

Authors:  K Hattori; P Angel; M M Le Beau; M Karin
Journal:  Proc Natl Acad Sci U S A       Date:  1988-12       Impact factor: 11.205

7.  Tumor necrosis factor acts synergistically with autocrine interferon-beta and increases interferon-beta mRNA levels in human fibroblasts.

Authors:  L F Reis; T Ho Lee; J Vilcek
Journal:  J Biol Chem       Date:  1989-10-05       Impact factor: 5.157

8.  Molecular cloning and sequencing of the gene encoding human angiotensin II type 1 receptor.

Authors:  H Furuta; D F Guo; T Inagami
Journal:  Biochem Biophys Res Commun       Date:  1992-02-28       Impact factor: 3.575

9.  Quantification of HIV-1 RNA in plasma using NASBA during HIV-1 primary infection.

Authors:  B van Gemen; T Kievits; R Schukkink; D van Strijp; L T Malek; R Sooknanan; H G Huisman; P Lens
Journal:  J Virol Methods       Date:  1993-07       Impact factor: 2.014

10.  The human fibroblast and human immune interferon genes and their expression in homologous and heterologous cells.

Authors:  W Fiers; E Remaut; R Devos; H Cheroutre; R Contreras; D Gheysen; W Degrave; P Stanssens; J Tavernier; Y Taya; J Content
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1982-09-24       Impact factor: 6.237

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  13 in total

Review 1.  Characteristics and applications of nucleic acid sequence-based amplification (NASBA).

Authors:  Birgit Deiman; Pierre van Aarle; Peter Sillekens
Journal:  Mol Biotechnol       Date:  2002-02       Impact factor: 2.695

2.  Real-time nucleic acid sequence-based amplification assay for detection of hepatitis A virus.

Authors:  Khaled H Abd el-Galil; M A el-Sokkary; S M Kheira; Andre M Salazar; Marylynn V Yates; Wilfred Chen; Ashok Mulchandani
Journal:  Appl Environ Microbiol       Date:  2005-11       Impact factor: 4.792

3.  Cleavage-based signal amplification of RNA.

Authors:  Yongyun Zhao; Li Zhou; Zhuo Tang
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

4.  Detection of human cytomegalovirus pp67 late gene transcripts in cerebrospinal fluid of human immunodeficiency virus type 1-infected patients by nucleic acid sequence-based amplification.

Authors:  F Zhang; S Tetali; X P Wang; M H Kaplan; F V Cromme; C C Ginocchio
Journal:  J Clin Microbiol       Date:  2000-05       Impact factor: 5.948

5.  Quantification of SSX mRNA expression in human bone and soft tissue tumors using nucleic acid sequence-based amplification.

Authors:  Norifumi Naka; Susumu Joyama; Yoshitane Tsukamoto; Kiyoko Yoshioka; Nobuyuki Hashimoto; Takeshi Ujiiye; Tsukasa Hayashi; Masako Kawase; Masayuki Mano; Shingo Ishiguro; Akira Myoui; Takafumi Ueda; Hideki Yoshikawa; Nobuhito Araki; Kazuyuki Itoh
Journal:  J Mol Diagn       Date:  2005-05       Impact factor: 5.568

6.  Light Scattering Technology-Combined Ligation-Dependent Loop-Mediated Isothermal Amplification (LL-LAMP) for Sensitive Detection of RNA.

Authors:  Honghong Wang; Shuhui Wang; Hui Wang; Yuanwen Liang; Yuting Jia; Zhengping Li
Journal:  ACS Omega       Date:  2022-06-01

7.  Comparison of the RNA-amplification based methods RT-PCR and NASBA for the detection of circulating tumour cells.

Authors:  S A Burchill; L Perebolte; C Johnston; B Top; P Selby
Journal:  Br J Cancer       Date:  2002-01-07       Impact factor: 7.640

8.  Interferons in enteroviral heart disease: modulation of cytokine expression and antiviral activity.

Authors:  Albert Heim; Sabine Weiss
Journal:  Med Microbiol Immunol       Date:  2003-09-12       Impact factor: 3.402

9.  Ratiometric Fluorescence Coding for Multiplex Nucleic Acid Amplification Testing.

Authors:  Ye Zhang; Liben Chen; Kuangwen Hsieh; Tza-Huei Wang
Journal:  Anal Chem       Date:  2018-10-05       Impact factor: 6.986

10.  Development of real-time NASBA assays with molecular beacon detection to quantify mRNA coding for HHV-8 lytic and latent genes.

Authors:  Abeltje M Polstra; J Goudsmit; M Cornelissen
Journal:  BMC Infect Dis       Date:  2002-09-04       Impact factor: 3.090

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