Literature DB >> 952888

Temperature dependence of the 31P chemical shifts of nucleic acids. A prode of phosphate ester torsional conformations.

D G Gorenstein, J B Findlay, R K Momii, B A Luxon, D Kar.   

Abstract

The temperature dependence of the 31P chemical shifts of the ribodinucleoside monophosphates, ApA, GpC, CpC, UpU, and ApU, of the deoxyribonucleic acids, d-ApT, TpT, d-ApA, and d-pApT, and of the homopolyribonucleic acids poly(G), poly(U), poly(A) is shown to provide information on the helix-coli transition in nucleic acids. The base stacked, helical structure with a gauche,gauche phosphate ester torsional conformation is 0.2-0.6 ppm upfield from the random coil conformation. In contrast, the 31P chemical shifts of dimethyl and diethyl phosphate do not change significantly with temperature. These results support our earlier hypothesis that 31P shifts are sensitive probes of torsional conformations with phosphate esters in gauche,gauche conformations having 31P shifts upfield from nongauche conformations.

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Year:  1976        PMID: 952888     DOI: 10.1021/bi00662a023

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  15 in total

1.  Bulge-out structures in the single-stranded trimer AUA and in the duplex (CUGGUGCGG).(CCGCCCAG). A model-building and NMR study.

Authors:  Y T van den Hoogen; A A van Beuzekom; E de Vroom; G A van der Marel; J H van Boom; C Altona
Journal:  Nucleic Acids Res       Date:  1988-06-10       Impact factor: 16.971

2.  1H NMR investigation of the conformational states of DNA in nucleosome core particles.

Authors:  J Feigon; D R Kearns
Journal:  Nucleic Acids Res       Date:  1979       Impact factor: 16.971

3.  31P NMR studies of the solution structure and dynamics of nucleosomes and DNA.

Authors:  L Klevan; I M Armitage; D M Crothers
Journal:  Nucleic Acids Res       Date:  1979-04       Impact factor: 16.971

4.  The tetraribonucleotide rCpGpCpG forms a left-handed Z-RNA double-helix.

Authors:  P W Davis; K Hall; P Cruz; I Tinoco; T Neilson
Journal:  Nucleic Acids Res       Date:  1986-02-11       Impact factor: 16.971

5.  Steroid diamine-nucleic acid interactions: partial insertion of dipyrandium between unstacked base pairs of the poly(dA-dT) duplex in solution.

Authors:  D J Patel; L L Canuel
Journal:  Proc Natl Acad Sci U S A       Date:  1979-01       Impact factor: 11.205

6.  Computational studies of polynucleotide flexibility.

Authors:  W K Olson
Journal:  Nucleic Acids Res       Date:  1982-02-11       Impact factor: 16.971

7.  Stimulation of oligonucleotide binding of estradiol receptor complexes by accessory proteins.

Authors:  K H Thanki; T A Beach; A I Bass; H W Dickerman
Journal:  Nucleic Acids Res       Date:  1979-08-24       Impact factor: 16.971

8.  Tendencies of 31P chemical shifts changes in NMR spectra of nucleotide derivatives.

Authors:  A V Lebedev; A I Rezvukhin
Journal:  Nucleic Acids Res       Date:  1984-07-25       Impact factor: 16.971

9.  Salt-induced conformational changes of poly(dA-dT).

Authors:  M Vorlícková; J Kypr; V Kleinwächter; E Palecek
Journal:  Nucleic Acids Res       Date:  1980-09-11       Impact factor: 16.971

10.  A conformational study of nucleic acid phosphate ester bonds using phosphorus-31 nuclear magnetic resonance.

Authors:  C A Haasnoot; C Altona
Journal:  Nucleic Acids Res       Date:  1979-03       Impact factor: 16.971

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