Literature DB >> 9512049

Low-frequency Raman spectra of lysozyme crystals and oriented DNA films: dynamics of crystal water.

H Urabe1, Y Sugawara, M Ataka, A Rupprecht.   

Abstract

We observed low-frequency Raman spectra of tetragonal lysozyme crystals and DNA films, with varying water content of the samples. The spectra are fitted well by sums of relaxation modes and damped harmonic oscillators in the region from approximately 1 cm(-1) to 250 cm(-1). The relaxation modes are due to crystal water, and the distribution of relaxation times is determined. In wet samples, the relaxation time of a small part of the water molecules is a little longer than that of bulk water. The relaxation time of a considerable part of the crystal water, which belongs mainly to the secondary hydration shell, is an order of magnitude longer than that of bulk water. Furthermore, the relaxation time of some water molecules in the primary hydration shell of semidry samples is shorter than we expected. Thus we have shown that low-frequency Raman measurements combined with properly oriented samples can give specific information on the dynamics of hydration water in the ps range. On the other hand, we concluded, based on polarized Raman spectra of lysozyme crystals, that the damped oscillators correspond to essentially intramolecular vibrational modes.

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Year:  1998        PMID: 9512049      PMCID: PMC1299499          DOI: 10.1016/S0006-3495(98)77865-8

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  14 in total

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7.  The origin of the A to B transition in DNA fibers and films.

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  10 in total

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Journal:  Biophys J       Date:  2003-08       Impact factor: 4.033

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Authors:  S Speziale; F Jiang; C L Caylor; S Kriminski; C-S Zha; R E Thorne; T S Duffy
Journal:  Biophys J       Date:  2003-11       Impact factor: 4.033

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Authors:  Richard E Darienzo; Tatsiana Mironava; Rina Tannenbaum
Journal:  J Nanosci Nanotechnol       Date:  2019-08-01

6.  Counterion vibrations in the DNA low-frequency spectra.

Authors:  S M Perepelytsya; S N Volkov
Journal:  Eur Phys J E Soft Matter       Date:  2007-12-05       Impact factor: 1.890

7.  Carbon Nanotubes' Effect on Mitochondrial Oxygen Flux Dynamics: Polarography Experimental Study and Machine Learning Models using Star Graph Trace Invariants of Raman Spectra.

Authors:  Michael González-Durruthy; Jose M Monserrat; Bakhtiyor Rasulev; Gerardo M Casañola-Martín; José María Barreiro Sorrivas; Sergio Paraíso-Medina; Víctor Maojo; Humberto González-Díaz; Alejandro Pazos; Cristian R Munteanu
Journal:  Nanomaterials (Basel)       Date:  2017-11-11       Impact factor: 5.076

8.  New Method to Study the Vibrational Modes of Biomolecules in the Terahertz Range Based on a Single-Stage Raman Spectrometer.

Authors:  Basanth S Kalanoor; Maria Ronen; Ziv Oren; Doron Gerber; Yaakov R Tischler
Journal:  ACS Omega       Date:  2017-03-31

9.  Fingerprints of Conformational States of Human Hsp70 at Sub-THz Frequencies.

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Journal:  ACS Omega       Date:  2016-12-01

10.  Fractal Silver Dendrites as 3D SERS Platform for Highly Sensitive Detection of Biomolecules in Hydration Conditions.

Authors:  Maria José Lo Faro; Cristiano D'Andrea; Antonio Alessio Leonardi; Dario Morganti; Alessia Irrera; Barbara Fazio
Journal:  Nanomaterials (Basel)       Date:  2019-11-16       Impact factor: 5.076

  10 in total

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