Literature DB >> 29732506

Terahertz-infrared spectroscopy of Shewanella oneidensis MR-1 extracellular matrix.

Z V Gagkaeva1, E S Zhukova1, V Grinenko2, A K Grebenko1, K V Sidoruk3, T A Voeikova3, M Dressel1,4, B P Gorshunov5.   

Abstract

Employing optical spectroscopy we have performed a comparative study of the dielectric response of extracellular matrix and filaments of electrogenic bacteria Shewanella oneidensis MR-1, cytochrome c, and bovine serum albumin. Combining infrared transmission measurements on thin layers with data of the terahertz spectra, we obtain the dielectric permittivity and AC conductivity spectra of the materials in a broad frequency band from a few cm-1 up to 7000 cm-1 in the temperature range from 5 to 300 K. Strong absorption bands are observed in the three materials that cover the range from 10 to 300 cm-1 and mainly determine the terahertz absorption. When cooled down to liquid helium temperatures, the bands in Shewanella oneidensis MR-1 and cytochrome c reveal a distinct fine structure. In all three materials, we identify the presence of liquid bound water in the form of librational and translational absorption bands at ≈ 200 and ≈ 600 cm-1, respectively. The sharp excitations seen above 1000 cm-1 are assigned to intramolecular vibrations.

Entities:  

Keywords:  Conductivity mechanism; Infrared spectroscopy; Shewanella oneidensis; Terahertz spectroscopy

Mesh:

Substances:

Year:  2018        PMID: 29732506      PMCID: PMC6082806          DOI: 10.1007/s10867-018-9497-4

Source DB:  PubMed          Journal:  J Biol Phys        ISSN: 0092-0606            Impact factor:   1.365


  43 in total

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3.  Microbial nanowires: a new paradigm for biological electron transfer and bioelectronics.

Authors:  Nikhil S Malvankar; Derek R Lovley
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4.  Visualization of charge propagation along individual pili proteins using ambient electrostatic force microscopy.

Authors:  Nikhil S Malvankar; Sibel Ebru Yalcin; Mark T Tuominen; Derek R Lovley
Journal:  Nat Nanotechnol       Date:  2014-10-19       Impact factor: 39.213

5.  The molecular density of states in bacterial nanowires.

Authors:  Mohamed Y El-Naggar; Yuri A Gorby; Wei Xia; Kenneth H Nealson
Journal:  Biophys J       Date:  2008-04-25       Impact factor: 4.033

6.  The determinants of stability and folding in evolutionarily diverged cytochromes c.

Authors:  Megan C Thielges; Jörg Zimmermann; Philip E Dawson; Floyd E Romesberg
Journal:  J Mol Biol       Date:  2009-03-04       Impact factor: 5.469

7.  Infrared spectroscopic discrimination between the loop and alpha-helices and determination of the loop diffusion kinetics by temperature-jump time-resolved infrared spectroscopy for cytochrome c.

Authors:  Manping Ye; Qing-Li Zhang; Heng Li; Yu-Xiang Weng; Wei-Chi Wang; Xiang-Gang Qiu
Journal:  Biophys J       Date:  2007-06-08       Impact factor: 4.033

8.  Observation of dielectric universalities in albumin, cytochrome C and Shewanella oneidensis MR-1 extracellular matrix.

Authors:  K A Motovilov; M Savinov; E S Zhukova; A A Pronin; Z V Gagkaeva; V Grinenko; K V Sidoruk; T A Voeikova; P Yu Barzilovich; A K Grebenko; S V Lisovskii; V I Torgashev; P Bednyakov; J Pokorný; M Dressel; B P Gorshunov
Journal:  Sci Rep       Date:  2017-11-16       Impact factor: 4.379

9.  Aromatic amino acids required for pili conductivity and long-range extracellular electron transport in Geobacter sulfurreducens.

Authors:  Madeline Vargas; Nikhil S Malvankar; Pier-Luc Tremblay; Ching Leang; Jessica A Smith; Pranav Patel; Oona Snoeyenbos-West; Oona Synoeyenbos-West; Kelly P Nevin; Derek R Lovley
Journal:  MBio       Date:  2013-03-12       Impact factor: 7.867

10.  Low Energy Atomic Models Suggesting a Pilus Structure that could Account for Electrical Conductivity of Geobacter sulfurreducens Pili.

Authors:  Ke Xiao; Nikhil S Malvankar; Chuanjun Shu; Eric Martz; Derek R Lovley; Xiao Sun
Journal:  Sci Rep       Date:  2016-03-22       Impact factor: 4.379

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